Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001093128.1 | Gene: | LRRN3 / 54674 | HGNCID: | 17200 | Length: | 708 | Species: | Homo sapiens |
Alignment Length: | 452 | Identity: | 120/452 - (26%) |
---|---|---|---|
Similarity: | 198/452 - (43%) | Gaps: | 48/452 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 NCPPGCQCD-----------DNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSIQFYA 82
Fly 83 ELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQ 147
Fly 148 GTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGM 212
Fly 213 NTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRL 277
Fly 278 EQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQE 342
Fly 343 GALSGLSQLKHVVLKANALTSLAEG-LFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDD 406
Fly 407 VSELLCEFPERLRGESLR--HLNPAMMGCTHADPRKQALIGALLVGSAATITALALVLYRCR 466 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 6/17 (35%) |
LRR_8 | 83..142 | CDD:290566 | 18/58 (31%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 129..421 | CDD:238064 | 78/292 (27%) | ||
LRR_8 | 132..190 | CDD:290566 | 18/57 (32%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 5/23 (22%) | ||
LRR_8 | 203..263 | CDD:290566 | 14/59 (24%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 252..308 | CDD:290566 | 20/55 (36%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 325..384 | CDD:290566 | 14/59 (24%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 7/22 (32%) | ||
LRRN3 | NP_001093128.1 | LRRNT | 28..72 | CDD:214470 | 9/43 (21%) |
LRR 1 | 70..91 | 6/20 (30%) | |||
leucine-rich repeat | 72..93 | CDD:275380 | 7/20 (35%) | ||
LRR | <75..355 | CDD:227223 | 86/304 (28%) | ||
LRR 2 | 93..114 | 8/20 (40%) | |||
leucine-rich repeat | 94..117 | CDD:275380 | 8/22 (36%) | ||
LRR 3 | 117..138 | 6/20 (30%) | |||
leucine-rich repeat | 118..141 | CDD:275380 | 7/22 (32%) | ||
LRR 4 | 141..162 | 5/20 (25%) | |||
leucine-rich repeat | 142..165 | CDD:275380 | 6/22 (27%) | ||
LRR 5 | 165..186 | 6/20 (30%) | |||
leucine-rich repeat | 166..189 | CDD:275380 | 8/22 (36%) | ||
LRR 6 | 189..210 | 8/45 (18%) | |||
leucine-rich repeat | 190..213 | CDD:275380 | 9/47 (19%) | ||
LRR 7 | 213..234 | 5/20 (25%) | |||
leucine-rich repeat | 214..237 | CDD:275380 | 7/22 (32%) | ||
LRR 8 | 237..258 | 8/20 (40%) | |||
leucine-rich repeat | 238..261 | CDD:275380 | 9/22 (41%) | ||
LRR 9 | 261..282 | 7/20 (35%) | |||
leucine-rich repeat | 262..285 | CDD:275380 | 7/22 (32%) | ||
LRR 10 | 285..304 | 5/18 (28%) | |||
leucine-rich repeat | 286..310 | CDD:275380 | 6/23 (26%) | ||
LRR 11 | 310..332 | 4/21 (19%) | |||
leucine-rich repeat | 311..333 | CDD:275380 | 4/21 (19%) | ||
LRR 12 | 335..358 | 7/22 (32%) | |||
leucine-rich repeat | 336..359 | CDD:275380 | 7/22 (32%) | ||
PCC | 341..>442 | CDD:188093 | 27/109 (25%) | ||
Ig | 437..513 | CDD:325142 | 3/9 (33%) | ||
fn3 | 526..593 | CDD:306538 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 153 | 1.000 | Inparanoid score | I4346 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm8524 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103993 | |
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.960 |