Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102630.1 | Gene: | Flrt1 / 499308 | RGDID: | 1565152 | Length: | 674 | Species: | Rattus norvegicus |
Alignment Length: | 456 | Identity: | 115/456 - (25%) |
---|---|---|---|
Similarity: | 181/456 - (39%) | Gaps: | 106/456 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 CPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKT--IDSSIQFYAELTFLDLSSN 92
Fly 93 HLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIE 157
Fly 158 ELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMP-SLAELFLGMNTLQSIQAD 221
Fly 222 AFQDLKGLTRLELKGASLRN--ISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQ 284
Fly 285 NDFEVISEGAFMGLKQLKRLEV--NGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSG 347
Fly 348 LSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVSELLC 412
Fly 413 EFPERLRGESLRHLNPAMMGCTHADPRKQALIGALLVGSAATITALALVLYRCRHKIRETIKGGL 477
Fly 478 W 478 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 4/19 (21%) |
LRR_8 | 83..142 | CDD:290566 | 13/58 (22%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | 129..421 | CDD:238064 | 80/296 (27%) | ||
LRR_8 | 132..190 | CDD:290566 | 14/57 (25%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 203..263 | CDD:290566 | 26/62 (42%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 11/24 (46%) | ||
LRR_8 | 252..308 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 325..384 | CDD:290566 | 7/58 (12%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 4/23 (17%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 2/21 (10%) | ||
Flrt1 | NP_001102630.1 | PRK15370 | <58..>329 | CDD:185268 | 85/342 (25%) |
leucine-rich repeat | 108..128 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 129..152 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 153..178 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 179..199 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 200..223 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 224..249 | CDD:275380 | 11/24 (46%) | ||
leucine-rich repeat | 250..271 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 272..295 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 296..319 | CDD:275380 | 9/25 (36%) | ||
PCC | 300..>386 | CDD:188093 | 31/147 (21%) | ||
FN3 | 441..505 | CDD:214495 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
3 | 2.870 |