Protein Alignment trn and LOC4576240

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_001237076.3
• Gene: LOC4576240 / 4576240
• VectorBaseID: AGAMI1_014008
• Length: 410
• Species: Anopheles gambiae
• Alignment Length: 463
• Identity: 96/463 - (20%)
• Similarity: 156/463 - (33%)
• Gaps: 150/463 - (32%)

  Fly    42 VVQC-GEG----QLDVLPIALNPSIQ-RLVIKSNKIKTIDSSI-QFYAELTFLDLSSNHLMTI-- 97
            |.|| |.|    :|..:.:..:..:: |..|:..||..|:..| ...|...||...:|.:.|:
Mosquito    11 VGQCVGAGFFICELGTINMTSDGGVKLRRAIEKQKIVHIEKLIVAVSASGPFLQKITNFVDTVIY 75

  Fly    98 ---PQRTFAYQKKLQEVHLNHNKIGQI------SNKTFIG----------------------LSA 131
               ...||...        |.|.|.:|      :.:|||.                      ||.
Mosquito    76 NNYRDATFFVP--------NDNTISEIDIISARTTRTFIAGSNVNLESFSIEQCLIDRLPPTLSK 132

  Fly   132 VTVL---NLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRI--LYLDDNALT 191
            :|.|   ::|...::.|....|.....:..|:|..|:|..|.|........|.|  |||..|.|.
Mosquito   133 MTRLKSFSIRRCMLTVLRLDMFVENQNLNYLDLSYNQIRQLIPITGRPARMLSIAKLYLAGNVLE 197

  Fly   192 TVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRIL 256
            .: |..:|.|||.|:||::..|.:.::......||:.||                   |.::...
Mosquito   198 RL-DMAVFVAMPLLSELYITDNRIVTLDVSVSLDLRNLT-------------------LPKVETF 242

  Fly   257 DLSDNRLDRIPSVGLSKLV-RLEQLSLGQNDFEVIS----------EGAFMGLKQLKRLEVNGAL 310
            ....|.|.::|.  |.:|: :...:||..|:...:.          :..::...|:..:..:..:
Mosquito   243 SFGPNALTQMPI--LPRLMPKFNYISLFANNLTQLDMTYFRPYPNLQKIYITSNQITTVRASSPV 305

  Fly   311 RLKRV-------------MTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALT 362
            ||..|             :||  .|..|:..|||..|::
Mosquito   306 RLPLVHLVLTDNKITTFNITG--WDMPNITLLNLDGNRL-------------------------- 342

  Fly   363 SLAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVSELLCEFPERLRGESL-RHL 426
            :|...:|.......|.:..|||.|:.                      |..|.:||..:.| :..
Mosquito   343 TLVPPVFDRYPKVVLVMDRNPLPCNA----------------------LSPFKDRLNNDQLQKEQ 385

  Fly   427 NPAMMGCT 434
            .|.:|.||
Mosquito   386 RPLLMACT 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	6/19 (32%)
		LRR	82..406	CDD:443914	75/385 (19%)
		leucine-rich repeat	84..107	CDD:275380	6/27 (22%)
		leucine-rich repeat	108..131	CDD:275380	8/50 (16%)
		leucine-rich repeat	132..155	CDD:275380	5/25 (20%)
		leucine-rich repeat	156..179	CDD:275380	6/22 (27%)
		leucine-rich repeat	180..204	CDD:275380	11/25 (44%)
		leucine-rich repeat	205..228	CDD:275380	6/22 (27%)
		leucine-rich repeat	229..252	CDD:275380	3/22 (14%)
		leucine-rich repeat	253..276	CDD:275380	5/23 (22%)
		leucine-rich repeat	277..300	CDD:275380	3/32 (9%)
		leucine-rich repeat	301..322	CDD:275380	5/33 (15%)
		leucine-rich repeat	326..350	CDD:275380	4/23 (17%)
		leucine-rich repeat	351..373	CDD:275380	2/21 (10%)
		LRRCT	382..434	CDD:214507	11/52 (21%)
LOC4576240	XP_001237076.3	None