Protein Alignment trn and CG7896

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: NP_651754.1
• Gene: CG7896 / 43552
• FlyBaseID: FBgn0039728
• Length: 1392
• Species: Drosophila melanogaster
• Alignment Length: 700
• Identity: 159/700 - (22%)
• Similarity: 265/700 - (37%)
• Gaps: 196/700 - (28%)

  Fly    57 LNP-----------SIQRLVIKSNKIKTIDSSI--------QFYAE-----------------LT 85
            |||           :::.|.:..||||.|:..:        :||.:                 |.
  Fly   147 LNPIFSTAELHVLKNLRLLDLSGNKIKLIEEGLLKGCMDLKEFYIDRNSLTSVPTNSLNGPSALR 211

  Fly    86 FLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTF 150
            .|.|..|.:.::...:|..|::|:.:.|.||.|..|.:..|.||..:..:.|.||:||.|:...|
  Fly   212 HLSLRQNQIGSLLADSFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDVF 276

  Fly   151 TPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTL 215
            ..|..:::|:|.||..|.....|...:..|:.|.|..|.|..: |....|.:.||..|.:..||:
  Fly   277 EKLQSLQKLDLSENFFGQFPTVALAAVPGLKHLNLSSNMLQQL-DYTHMQVVRSLESLDISRNTI 340

  Fly   216 QSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQL 280
            .:|....|:::..|..|:|...|||.|..|:..||..|:.|.:.||.:..:|...|.:|.:|..|
  Fly   341 TTITPGTFREMGALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTSL 405

  Fly   281 SLGQNDFEVISEGAFMGLKQLKRLEVNGALR-------------LKRVMTGAFSDNGNLEYLNLS 332
            .|..|....:|            .|:.|:|:             ::.:..|:|....:|..|:||
  Fly   406 QLDYNRVAALS------------AEILGSLQAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLS 458

  Fly   333 SNKMLLEVQEGALSGL-SQLKHVVLKANALTSLAEGLFPW--KDLQTLDLSENPLSCDCRVMWLH 394
            .|.:.: :.....:|| |.|..:.|..|.||.|  |..||  .:|::||||.|.|:
  Fly   459 GNSLAV-INADTFAGLESTLMALKLSQNRLTGL--GGAPWVLPELRSLDLSGNTLT--------- 511

  Fly   395 NLLVAKNASQDDVSELLCEFPERLRGESLRHLNPAMMGCTHADPRKQALIGALLVGSAATITALA 459
                              |.|..: .|.|.::....:...|..|    |.|||.    ..:..|.
  Fly   512 ------------------ELPSTI-FEELENVQSLNLSGNHLTP----LTGALF----KPLDRLQ 549

  Fly   460 LV-LYRCRHKIRETIKGGLWGNSALGRKEREYQKTFCDEDYMSRHQHHPCSLGIHSTFPNTYTAP 523
            :: |..|  .||: |.|.|....      ::.:..:.:::.:...|        ..:|.|.:
  Fly   550 VIDLSGC--NIRQ-ISGDLLAGL------QDLKHIYLNDNQLQELQ--------DGSFVNLW--- 594

  Fly   524 HHPGATHHYGMCPMPVNDLGAIDPQQKFQQLVVPTATMISEKKLNNNKALVSQGAIDDSASFVLH 588
                             ::.:||                    |:||:.    |:| .|.:||..
  Fly   595 -----------------NISSID--------------------LSNNRI----GSI-RSGAFVNV 617

  Fly   589 MKSATMGRDVHQQNPQLNHYTKPQFLSATA----TVGDSCYSYADVPMVHGAPLGGPNQPQLRLT 649
            ||...:  |:|  ..||:.:....|.:.|.    .:.|:..||.       .|......|:||..
  Fly   618 MKLQKL--DLH--GNQLSAFKGEYFNTGTGIEELDISDNQLSYL-------FPSSFRIHPRLREI 671

  Fly   650 QEHFKQRELYDQEMGSEI-------LDHNYIYSNTHYSMPLEQLGRSKTP 692
            :....:...:..|:.|.:       |.||.:.:       :|:|..::.|
  Fly   672 RAANNKFSFFPAELISTLQYLEHIDLSHNQLKT-------IEELDFARLP 714

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	6/25 (24%)
		LRR	82..406	CDD:443914	94/356 (26%)
		leucine-rich repeat	84..107	CDD:275380	6/22 (27%)
		leucine-rich repeat	108..131	CDD:275380	9/22 (41%)
		leucine-rich repeat	132..155	CDD:275380	8/22 (36%)
		leucine-rich repeat	156..179	CDD:275380	6/22 (27%)
		leucine-rich repeat	180..204	CDD:275380	7/23 (30%)
		leucine-rich repeat	205..228	CDD:275380	6/22 (27%)
		leucine-rich repeat	229..252	CDD:275380	10/22 (45%)
		leucine-rich repeat	253..276	CDD:275380	7/22 (32%)
		leucine-rich repeat	277..300	CDD:275380	5/22 (23%)
		leucine-rich repeat	301..322	CDD:275380	5/33 (15%)
		leucine-rich repeat	326..350	CDD:275380	7/24 (29%)
		leucine-rich repeat	351..373	CDD:275380	9/23 (39%)
		LRRCT	382..434	CDD:214507	6/51 (12%)
CG7896	NP_651754.1	PRK15370	20..>410	CDD:185268	74/263 (28%)
		leucine-rich repeat	109..132	CDD:275380
		leucine-rich repeat	133..161	CDD:275380	3/13 (23%)
		leucine-rich repeat	162..185	CDD:275380	6/22 (27%)
		leucine-rich repeat	186..209	CDD:275380	2/22 (9%)
		leucine-rich repeat	210..233	CDD:275380	6/22 (27%)
		leucine-rich repeat	234..257	CDD:275380	9/22 (41%)
		PLN00113	237..>750	CDD:215061	140/609 (23%)
		leucine-rich repeat	258..281	CDD:275380	8/22 (36%)
		leucine-rich repeat	282..329	CDD:275380	13/47 (28%)
		leucine-rich repeat	330..353	CDD:275380	6/22 (27%)
		leucine-rich repeat	354..377	CDD:275380	10/22 (45%)
		leucine-rich repeat	378..401	CDD:275380	7/22 (32%)
		leucine-rich repeat	402..425	CDD:275380	8/34 (24%)
		leucine-rich repeat	428..451	CDD:275380	2/22 (9%)
		leucine-rich repeat	452..473	CDD:275380	5/21 (24%)
		leucine-rich repeat	477..497	CDD:275378	9/21 (43%)
		leucine-rich repeat	500..523	CDD:275380	11/50 (22%)
		leucine-rich repeat	524..547	CDD:275380	6/30 (20%)
		leucine-rich repeat	548..571	CDD:275380	8/31 (26%)
		leucine-rich repeat	572..595	CDD:275380	3/50 (6%)
		leucine-rich repeat	596..619	CDD:275380	10/47 (21%)
		leucine-rich repeat	620..643	CDD:275380	5/26 (19%)
		leucine-rich repeat	644..667	CDD:275380	4/29 (14%)
		leucine-rich repeat	668..691	CDD:275380	4/22 (18%)
		LRR	<684..1020	CDD:443914	7/37 (19%)
		leucine-rich repeat	692..715	CDD:275380	5/29 (17%)
		leucine-rich repeat	716..739	CDD:275380
		leucine-rich repeat	740..761	CDD:275380
		leucine-rich repeat	764..789	CDD:275380
		leucine-rich repeat	790..810	CDD:275380
		leucine-rich repeat	818..850	CDD:275380
		leucine-rich repeat	863..883	CDD:275378
		leucine-rich repeat	884..907	CDD:275380
		leucine-rich repeat	908..933	CDD:275380
		leucine-rich repeat	934..955	CDD:275380
		leucine-rich repeat	958..982	CDD:275380
		leucine-rich repeat	983..1055	CDD:275380
		leucine-rich repeat	1009..1033	CDD:275380
		leucine-rich repeat	1058..1085	CDD:275380
		LRRCT	1121..1168	CDD:214507