Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_982350.1 | Gene: | rtn4rl2b / 403309 | ZFINID: | ZDB-GENE-040310-2 | Length: | 457 | Species: | Danio rerio |
Alignment Length: | 558 | Identity: | 124/558 - (22%) |
---|---|---|---|
Similarity: | 191/558 - (34%) | Gaps: | 186/558 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 IWCILASIGVEPAAGLANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDS 76
Fly 77 SIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQ 141
Fly 142 ISELHQGTFTPLLKIEELNLGEN-RIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSL 205
Fly 206 AELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVG 270
Fly 271 LSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNK 335
Fly 336 MLLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVM----WLHNL 396
Fly 397 LVAKNASQDDVSELLCEFPERLRGESLRHLNPAMMG-CTHADPRKQALIGALLVGSAATITALAL 460
Fly 461 VLYRCR-----------HKIRETIKGGLWGN---------------------SALGRKE-REYQK 492
Fly 493 TFCDEDYMS-RHQHHPCSLGIHSTFPNTYTAPHHPGAT 529 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 4/17 (24%) |
LRR_8 | 83..142 | CDD:290566 | 5/58 (9%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 0/22 (0%) | ||
LRR_RI | 129..421 | CDD:238064 | 79/296 (27%) | ||
LRR_8 | 132..190 | CDD:290566 | 21/58 (36%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 11/23 (48%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 5/23 (22%) | ||
LRR_8 | 203..263 | CDD:290566 | 11/59 (19%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 252..308 | CDD:290566 | 20/55 (36%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 325..384 | CDD:290566 | 13/58 (22%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 3/21 (14%) | ||
rtn4rl2b | NP_982350.1 | LRRNT | 40..71 | CDD:214470 | 8/31 (26%) |
leucine-rich repeat | 53..70 | CDD:275380 | 3/16 (19%) | ||
leucine-rich repeat | 73..93 | CDD:275380 | 5/42 (12%) | ||
LRR_RI | 93..>326 | CDD:238064 | 85/339 (25%) | ||
LRR_8 | 95..153 | CDD:290566 | 21/83 (25%) | ||
leucine-rich repeat | 95..117 | CDD:275380 | 8/47 (17%) | ||
leucine-rich repeat | 118..142 | CDD:275380 | 11/23 (48%) | ||
leucine-rich repeat | 143..166 | CDD:275380 | 8/33 (24%) | ||
LRR_8 | 166..225 | CDD:290566 | 26/97 (27%) | ||
LRR_4 | 166..206 | CDD:289563 | 17/77 (22%) | ||
leucine-rich repeat | 167..190 | CDD:275380 | 12/60 (20%) | ||
leucine-rich repeat | 191..214 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 214..272 | CDD:290566 | 20/82 (24%) | ||
leucine-rich repeat | 215..238 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 239..262 | CDD:275380 | 9/46 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |