Protein Alignment trn and Con

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: NP_523930.3
• Gene: Con / 38590
• FlyBaseID: FBgn0005775
• Length: 691
• Species: Drosophila melanogaster
• Alignment Length: 460
• Identity: 112/460 - (24%)
• Similarity: 175/460 - (38%)
• Gaps: 148/460 - (32%)

  Fly    42 VVQCGEGQLDVLP-IALNP--SIQRLVIKSNKIKTIDSSIQFYAELTFLD---LSSNHLMTIPQR 100
            |:| ...:||.:| :.:.|  ::..:||:.::::.:.|  ..:|.|.||:   |::||:|.:.|.
  Fly   164 VIQ-NNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKS--YAFANLPFLERIILNNNHIMALDQD 225

  Fly   101 TFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENR 165
            .||...:|:|::|.||:|.::....|..|.....|.|..|.||.||:|.|..:.::..|||..|:
  Fly   226 AFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQ 290

  Fly   166 IGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLT 230
            |..|..:.|.||..|.:|.|..|.|..:.| .:|..:.||:|
  Fly   291 INVLTSEIFRGLGNLNVLKLTRNNLNFIGD-TVFAELWSLSE----------------------- 331

  Fly   231 RLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAF 295
                                     |:|.|||::|                        |||.|.
  Fly   332 -------------------------LELDDNRIER------------------------ISERAL 347

  Fly   296 MGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANA 360
            .||..||.|.:.                          |.:|.::..|.|.|...|..:.::||.
  Fly   348 DGLNTLKTLNLR--------------------------NNLLKKIDNGLLRGTPALLSINVQANK 386

  Fly   361 LTSLAEGLF-PWKD-----LQTLDLSENPLSCDCRVMWLHNLLVAKNAS-----QDDVSELLCEF 414
            |.:|....| |..|     ...|.:|:|...||||:.|:..|   ||.:     :|.:.:|.|..
  Fly   387 LETLTFYTFQPIMDNLVNSTSELLVSDNKFICDCRLQWIFEL---KNRTRHLQLRDSLEDLHCTL 448

  Fly   415 PERLRGESLRHLNPAMMGCTHADPRKQALIGALLVGSAATITALALVLYRCRHKIRETIKGGLWG 479
            .|    ..|.|.         .||....::..|.:|....|.:            .....||: |
  Fly   449 QE----PKLSHF---------VDPVPPTILDVLNIGGFTAIGS------------NSASMGGV-G 487

  Fly   480 NSALG 484
            ||.:|
  Fly   488 NSVVG 492

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	3/17 (18%)
		LRR	82..406	CDD:443914	86/337 (26%)
		leucine-rich repeat	84..107	CDD:275380	10/25 (40%)
		leucine-rich repeat	108..131	CDD:275380	8/22 (36%)
		leucine-rich repeat	132..155	CDD:275380	9/22 (41%)
		leucine-rich repeat	156..179	CDD:275380	9/22 (41%)
		leucine-rich repeat	180..204	CDD:275380	7/23 (30%)
		leucine-rich repeat	205..228	CDD:275380	2/22 (9%)
		leucine-rich repeat	229..252	CDD:275380	0/22 (0%)
		leucine-rich repeat	253..276	CDD:275380	6/22 (27%)
		leucine-rich repeat	277..300	CDD:275380	6/22 (27%)
		leucine-rich repeat	301..322	CDD:275380	3/20 (15%)
		leucine-rich repeat	326..350	CDD:275380	5/23 (22%)
		leucine-rich repeat	351..373	CDD:275380	7/22 (32%)
		LRRCT	382..434	CDD:214507	15/56 (27%)
Con	NP_523930.3	LRR	<157..459	CDD:443914	101/412 (25%)
		leucine-rich repeat	185..208	CDD:275380	5/24 (21%)
		leucine-rich repeat	209..232	CDD:275380	8/22 (36%)
		leucine-rich repeat	233..256	CDD:275380	8/22 (36%)
		leucine-rich repeat	257..280	CDD:275380	9/22 (41%)
		leucine-rich repeat	281..304	CDD:275380	9/22 (41%)
		leucine-rich repeat	305..328	CDD:275380	7/23 (30%)
		leucine-rich repeat	329..352	CDD:275380	14/94 (15%)
		leucine-rich repeat	353..376	CDD:275380	8/48 (17%)