Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001029182.1 | Gene: | Tril / 362364 | RGDID: | 1310827 | Length: | 811 | Species: | Rattus norvegicus |
Alignment Length: | 713 | Identity: | 163/713 - (22%) |
---|---|---|---|
Similarity: | 258/713 - (36%) | Gaps: | 204/713 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 IAFVGIWCILASIGVEPAAGLANCPPGCQCDDNTLVVQCGEG------------QLDVLPIALNP 59
Fly 60 S---------------IQRLVIKSNKIKTI-DSSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKL 108
Fly 109 QEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKA 173
Fly 174 FDGLSQLRILYLDDNAL-TTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGA 237
Fly 238 SLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLK 302
Fly 303 RLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEG 367
Fly 368 LFPWKD-LQTLDLSENPLSCDCRV----MWLHNLLVAKNASQDDVSELL--CEFPERLRGESLRH 425
Fly 426 LNPAMM---GCTHADPRKQALIGALLVGSAATITALALVLYRCRHKIRETIKGGLWGNSALGRKE 487
Fly 488 REYQKTFCDEDYMSRHQHHPCSLGIHSTFPNTYTAPHHPGATHHYGMC------PMPVNDLGAID 546
Fly 547 PQQKFQQLVVPTATMISEKKLNNNKALV-----SQGAIDDSASFVLHMKSATMGRDVHQQNPQLN 606
Fly 607 HYTKPQFLSATATVGDSCYSYADVPMVHGAPLGGP--NQPQLRLTQEHFKQRELYDQEMGSEI 667 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 4/18 (22%) |
LRR_8 | 83..142 | CDD:290566 | 21/58 (36%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 9/22 (41%) | ||
LRR_RI | 129..421 | CDD:238064 | 87/299 (29%) | ||
LRR_8 | 132..190 | CDD:290566 | 22/57 (39%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 203..263 | CDD:290566 | 23/59 (39%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 252..308 | CDD:290566 | 16/55 (29%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 0/20 (0%) | ||
LRR_8 | 325..384 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 3/23 (13%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 6/21 (29%) | ||
Tril | NP_001029182.1 | LRR_RI | 22..313 | CDD:238064 | 87/290 (30%) |
leucine-rich repeat | 37..57 | CDD:275378 | 1/19 (5%) | ||
LRR 1 | 61..81 | 3/19 (16%) | |||
LRR_8 | 84..143 | CDD:290566 | 15/58 (26%) | ||
LRR 2 | 84..105 | 4/20 (20%) | |||
leucine-rich repeat | 85..108 | CDD:275380 | 4/22 (18%) | ||
LRR 3 | 108..129 | 6/20 (30%) | |||
leucine-rich repeat | 109..132 | CDD:275380 | 7/22 (32%) | ||
LRR 4 | 132..153 | 8/20 (40%) | |||
leucine-rich repeat | 133..156 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 156..215 | CDD:290566 | 22/58 (38%) | ||
LRR 5 | 156..177 | 6/20 (30%) | |||
leucine-rich repeat | 157..180 | CDD:275380 | 8/22 (36%) | ||
LRR 6 | 180..201 | 8/20 (40%) | |||
leucine-rich repeat | 181..204 | CDD:275380 | 9/22 (41%) | ||
LRR 7 | 204..223 | 6/18 (33%) | |||
leucine-rich repeat | 205..230 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 229..289 | CDD:290566 | 23/59 (39%) | ||
LRR 8 | 230..251 | 8/20 (40%) | |||
leucine-rich repeat | 231..254 | CDD:275380 | 9/22 (41%) | ||
LRR 9 | 254..275 | 6/20 (30%) | |||
leucine-rich repeat | 255..278 | CDD:275380 | 8/22 (36%) | ||
LRR 10 | 278..298 | 8/19 (42%) | |||
leucine-rich repeat | 279..302 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 302..359 | CDD:290566 | 21/106 (20%) | ||
LRR 11 | 302..323 | 6/48 (13%) | |||
leucine-rich repeat | 303..323 | CDD:275380 | 6/47 (13%) | ||
LRR 12 | 326..347 | 9/26 (35%) | |||
leucine-rich repeat | 327..340 | CDD:275378 | 7/18 (39%) | ||
leucine-rich repeat | 351..363 | CDD:275378 | 5/11 (45%) | ||
TPKR_C2 | 359..406 | CDD:301599 | 16/51 (31%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 414..460 | 19/124 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 486..562 | 16/93 (17%) | |||
FN3 | 589..661 | CDD:214495 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
4 | 3.970 |