Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_821079.3 | Gene: | LRRTM3 / 347731 | HGNCID: | 19410 | Length: | 581 | Species: | Homo sapiens |
Alignment Length: | 597 | Identity: | 133/597 - (22%) |
---|---|---|---|
Similarity: | 214/597 - (35%) | Gaps: | 184/597 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 CPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSIQFYAELTFLDLSSNHL 94
Fly 95 MTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEEL 159
Fly 160 NLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQ 224
Fly 225 DLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEV 289
Fly 290 ISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNG------NLEYLNLSSNKMLLEVQEGALSGL 348
Fly 349 SQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVSELLCE 413
Fly 414 FPERLRGESL------------------------------------RHLN----PAMMGCTHADP 438
Fly 439 RKQA-----LIGALLVGSAA---TITALALVLY--------------------RCRHKIRETIKG 475
Fly 476 GLWGNSALGRKE--REYQKTFCDEDYM--------------SRHQHHPCSLGIHSTF-----PN- 518
Fly 519 TYTAPHHPGATH 530 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 6/17 (35%) |
LRR_8 | 83..142 | CDD:290566 | 16/58 (28%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 8/22 (36%) | ||
LRR_RI | 129..421 | CDD:238064 | 72/297 (24%) | ||
LRR_8 | 132..190 | CDD:290566 | 19/57 (33%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 203..263 | CDD:290566 | 13/59 (22%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 252..308 | CDD:290566 | 15/55 (27%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 325..384 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 2/21 (10%) | ||
LRRTM3 | NP_821079.3 | LRRNT | 33..61 | CDD:214470 | 13/51 (25%) |
LRR 1 | 63..83 | 5/19 (26%) | |||
leucine-rich repeat | 66..86 | CDD:275380 | 5/19 (26%) | ||
LRR_8 | 86..145 | CDD:404697 | 19/58 (33%) | ||
LRR 2 | 86..107 | 7/20 (35%) | |||
leucine-rich repeat | 87..110 | CDD:275380 | 8/22 (36%) | ||
LRR 3 | 110..131 | 7/20 (35%) | |||
leucine-rich repeat | 111..134 | CDD:275380 | 8/22 (36%) | ||
LRR 4 | 134..155 | 5/20 (25%) | |||
leucine-rich repeat | 135..158 | CDD:275380 | 7/22 (32%) | ||
PPP1R42 | 156..342 | CDD:411060 | 56/242 (23%) | ||
LRR 5 | 158..179 | 8/45 (18%) | |||
leucine-rich repeat | 159..182 | CDD:275380 | 10/47 (21%) | ||
LRR 6 | 182..203 | 5/20 (25%) | |||
leucine-rich repeat | 183..206 | CDD:275380 | 6/22 (27%) | ||
LRR 7 | 206..226 | 4/19 (21%) | |||
leucine-rich repeat | 207..230 | CDD:275380 | 5/22 (23%) | ||
LRR 8 | 230..251 | 6/20 (30%) | |||
leucine-rich repeat | 231..254 | CDD:275380 | 6/22 (27%) | ||
LRR 9 | 254..275 | 7/26 (27%) | |||
leucine-rich repeat | 255..279 | CDD:275380 | 7/29 (24%) | ||
LRR 10 | 279..300 | 11/32 (34%) | |||
leucine-rich repeat | 280..300 | CDD:275380 | 10/31 (32%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 377..408 | 5/30 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |