Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_849161.2 | Gene: | LRRTM1 / 347730 | HGNCID: | 19408 | Length: | 522 | Species: | Homo sapiens |
Alignment Length: | 597 | Identity: | 136/597 - (22%) |
---|---|---|---|
Similarity: | 216/597 - (36%) | Gaps: | 180/597 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 IWCIL-ASIGVEPAAGLANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTID 75
Fly 76 SSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGN 140
Fly 141 QISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSL 205
Fly 206 AELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVG 270
Fly 271 LSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRV--MTGAFSDNGNLEYLNLSS 333
Fly 334 NKMLLEVQE-GALSGLSQLKHVVLKANALTSLAEGLF-PWKDLQTLDLSENPLSCDCRV----MW 392
Fly 393 LHNLLVAKNASQDDVSELLCEFPERLRGESL------------------RHL-----------NP 428
Fly 429 AMMGCTHAD-----------PRKQALIGA-----------LLVGSAATITA---LALVLY---RC 465
Fly 466 ----RHKIRETIKGGLWGNSALGRKEREYQKTFCDEDYMSRHQHHPCSLGIHSTFPNTYTAPHHP 526
Fly 527 GA---THHYGMC 535 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 0/17 (0%) |
LRR_8 | 83..142 | CDD:290566 | 10/58 (17%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 4/22 (18%) | ||
LRR_RI | 129..421 | CDD:238064 | 86/299 (29%) | ||
LRR_8 | 132..190 | CDD:290566 | 21/57 (37%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 203..263 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 252..308 | CDD:290566 | 15/55 (27%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 325..384 | CDD:290566 | 18/60 (30%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 6/22 (27%) | ||
LRRTM1 | NP_849161.2 | LRR 1 | 64..87 | 11/22 (50%) | |
LRR_8 | 73..125 | CDD:290566 | 19/51 (37%) | ||
LRR_RI | <85..268 | CDD:238064 | 54/189 (29%) | ||
LRR 2 | 89..111 | 6/21 (29%) | |||
leucine-rich repeat | 91..114 | CDD:275380 | 7/22 (32%) | ||
LRR 3 | 112..135 | 7/23 (30%) | |||
LRR_8 | 113..173 | CDD:290566 | 19/60 (32%) | ||
leucine-rich repeat | 115..138 | CDD:275380 | 7/23 (30%) | ||
LRR 4 | 137..159 | 8/21 (38%) | |||
leucine-rich repeat | 139..162 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 161..221 | CDD:290566 | 14/59 (24%) | ||
LRR 5 | 161..183 | 4/21 (19%) | |||
leucine-rich repeat | 163..186 | CDD:275380 | 4/22 (18%) | ||
LRR 6 | 184..207 | 5/22 (23%) | |||
leucine-rich repeat | 187..210 | CDD:275380 | 6/22 (27%) | ||
LRR 7 | 209..231 | 6/21 (29%) | |||
leucine-rich repeat | 211..234 | CDD:275380 | 7/22 (32%) | ||
LRR 8 | 233..255 | 5/25 (20%) | |||
leucine-rich repeat | 235..257 | CDD:275380 | 5/25 (20%) | ||
LRR 9 | 256..278 | 8/23 (35%) | |||
LRR_8 | 257..315 | CDD:290566 | 17/59 (29%) | ||
LRR_4 | 257..297 | CDD:289563 | 13/41 (32%) | ||
leucine-rich repeat | 258..281 | CDD:275380 | 7/24 (29%) | ||
LRR 10 | 279..302 | 5/22 (23%) | |||
leucine-rich repeat | 282..300 | CDD:275380 | 5/17 (29%) | ||
leucine-rich repeat | 306..318 | CDD:275378 | 3/11 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 382..401 | 5/18 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |