| Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001028581.1 | Gene: | Lgr6 / 329252 | MGIID: | 2441805 | Length: | 967 | Species: | Mus musculus |
| Alignment Length: | 558 | Identity: | 138/558 - (24%) |
|---|---|---|---|
| Similarity: | 222/558 - (39%) | Gaps: | 155/558 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 10 VGIW-----CILASIGVEPAAGLAN--CPPGCQCDDNTLVV--QCGEGQLDVLPIALNPSIQRLV 65
Fly 66 IKSNKIKTIDSSIQFYAELT-FLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGL 129
Fly 130 SAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVP 194
Fly 195 DPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLS 259
Fly 260 DNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMG------------------------LKQ 300
Fly 301 LKRLEVNGALRLK-----------RVMT-----------GAFSDNGNLEYLNLSSNKM------- 336
Fly 337 --------------LLEVQEGALSGLSQLKHVVLKANALTSL-AEGLFPWKDLQTLDLSEN---- 382
Fly 383 -PLSCDCRVMWLH---NLLVAKNASQDDVSEL---------------LC---------------- 412
Fly 413 ----EFPER----LRGESLRH----LNPAMMGCTHADP 438 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 0/17 (0%) |
| LRR_8 | 83..142 | CDD:290566 | 20/59 (34%) | ||
| leucine-rich repeat | 84..107 | CDD:275380 | 9/23 (39%) | ||
| leucine-rich repeat | 108..131 | CDD:275380 | 8/22 (36%) | ||
| LRR_RI | 129..421 | CDD:238064 | 99/406 (24%) | ||
| LRR_8 | 132..190 | CDD:290566 | 20/57 (35%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 5/22 (23%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 180..204 | CDD:275380 | 11/23 (48%) | ||
| LRR_8 | 203..263 | CDD:290566 | 21/59 (36%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 252..308 | CDD:290566 | 21/79 (27%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 10/46 (22%) | ||
| leucine-rich repeat | 301..322 | CDD:275380 | 7/42 (17%) | ||
| LRR_8 | 325..384 | CDD:290566 | 18/85 (21%) | ||
| leucine-rich repeat | 326..350 | CDD:275380 | 8/44 (18%) | ||
| leucine-rich repeat | 351..373 | CDD:275380 | 5/22 (23%) | ||
| Lgr6 | NP_001028581.1 | LRRNT | 34..68 | CDD:214470 | 11/57 (19%) |
| LRR_4 | 70..107 | CDD:289563 | 12/36 (33%) | ||
| leucine-rich repeat | 70..91 | CDD:275380 | 7/20 (35%) | ||
| LRR 1 | 91..112 | 6/20 (30%) | |||
| LRR_8 | 92..150 | CDD:290566 | 16/57 (28%) | ||
| LRR_4 | 92..131 | CDD:289563 | 12/38 (32%) | ||
| leucine-rich repeat | 92..115 | CDD:275380 | 8/22 (36%) | ||
| LRR 2 | 115..136 | 4/20 (20%) | |||
| leucine-rich repeat | 116..139 | CDD:275380 | 5/22 (23%) | ||
| LRR_8 | 138..198 | CDD:290566 | 23/60 (38%) | ||
| LRR 3 | 139..160 | 5/20 (25%) | |||
| leucine-rich repeat | 140..163 | CDD:275380 | 7/22 (32%) | ||
| LRR_RI | 143..392 | CDD:238064 | 67/250 (27%) | ||
| LRR 4 | 163..186 | 11/23 (48%) | |||
| leucine-rich repeat | 164..187 | CDD:275380 | 11/23 (48%) | ||
| LRR_8 | 186..246 | CDD:290566 | 21/59 (36%) | ||
| LRR 5 | 187..208 | 6/20 (30%) | |||
| leucine-rich repeat | 188..211 | CDD:275380 | 8/22 (36%) | ||
| LRR 6 | 211..232 | 5/20 (25%) | |||
| leucine-rich repeat | 212..235 | CDD:275380 | 7/22 (32%) | ||
| LRR 7 | 235..256 | 7/21 (33%) | |||
| leucine-rich repeat | 236..258 | CDD:275380 | 8/22 (36%) | ||
| LRR_8 | 258..314 | CDD:290566 | 13/55 (24%) | ||
| LRR 8 | 258..279 | 8/20 (40%) | |||
| leucine-rich repeat | 259..282 | CDD:275380 | 9/22 (41%) | ||
| LRR 9 | 282..302 | 0/19 (0%) | |||
| leucine-rich repeat | 283..304 | CDD:275380 | 0/20 (0%) | ||
| LRR 10 | 303..325 | 6/21 (29%) | |||
| LRR_8 | 305..364 | CDD:290566 | 12/58 (21%) | ||
| leucine-rich repeat | 307..348 | CDD:275380 | 7/40 (18%) | ||
| LRR 11 | 329..350 | 2/20 (10%) | |||
| LRR 12 | 353..374 | 5/20 (25%) | |||
| leucine-rich repeat | 354..375 | CDD:275380 | 5/20 (25%) | ||
| LRR_8 | 375..434 | CDD:290566 | 13/58 (22%) | ||
| LRR 13 | 375..396 | 1/20 (5%) | |||
| leucine-rich repeat | 376..399 | CDD:275380 | 3/22 (14%) | ||
| LRR 14 | 399..420 | 5/20 (25%) | |||
| leucine-rich repeat | 400..421 | CDD:275380 | 5/20 (25%) | ||
| LRR 15 | 423..443 | 7/19 (37%) | |||
| leucine-rich repeat | 424..444 | CDD:275380 | 7/19 (37%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR24373 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.010 | |||||