| Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_852045.1 | Gene: | Rtn4rl2 / 311169 | RGDID: | 727797 | Length: | 420 | Species: | Rattus norvegicus |
| Alignment Length: | 556 | Identity: | 133/556 - (23%) |
|---|---|---|---|
| Similarity: | 190/556 - (34%) | Gaps: | 195/556 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 14 CILASIGVEPAAGLANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSI 78
Fly 79 QFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQIS 143
Fly 144 ELHQGTFTPLLKIEELNLGENR-IGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAE 207
Fly 208 LFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLS 272
Fly 273 KLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKML 337
Fly 338 LEVQEGALSGLSQLKHVVLKANALTSL-AEGLFPWKDLQTLDLSENPLSCDCRV----MWLHNLL 397
Fly 398 VAKNASQDDVSELLCEFPERLRGESLRHLNPA-MMGCTHADPRKQA-----------LIGALLVG 450
Fly 451 SAATITALALVLYRCRHKIRETIKGGLWGNSALGRK------EREYQKTFCDEDYMSRHQHHPCS 509
Fly 510 LGIHSTFPNTYTAPHHPGATHHYGMCPMPVNDLGAI 545 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 5/17 (29%) |
| LRR | 82..406 | CDD:443914 | 83/329 (25%) | ||
| leucine-rich repeat | 84..107 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 108..131 | CDD:275380 | 0/22 (0%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 4/22 (18%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 12/23 (52%) | ||
| leucine-rich repeat | 180..204 | CDD:275380 | 7/23 (30%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 10/22 (45%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 0/22 (0%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 4/22 (18%) | ||
| leucine-rich repeat | 301..322 | CDD:275380 | 9/20 (45%) | ||
| leucine-rich repeat | 326..350 | CDD:275380 | 2/23 (9%) | ||
| leucine-rich repeat | 351..373 | CDD:275380 | 8/22 (36%) | ||
| LRRCT | 382..434 | CDD:214507 | 15/56 (27%) | ||
| Rtn4rl2 | NP_852045.1 | LRR | <55..>261 | CDD:443914 | 85/329 (26%) |
| LRR 1 | 61..82 | 7/21 (33%) | |||
| leucine-rich repeat | 62..83 | CDD:275380 | 6/21 (29%) | ||
| LRR 2 | 83..104 | 11/68 (16%) | |||
| leucine-rich repeat | 84..107 | CDD:275380 | 12/70 (17%) | ||
| LRR 3 | 107..129 | 10/21 (48%) | |||
| leucine-rich repeat | 108..132 | CDD:275380 | 12/23 (52%) | ||
| LRR 4 | 132..153 | 7/21 (33%) | |||
| leucine-rich repeat | 133..156 | CDD:275380 | 7/23 (30%) | ||
| LRR 5 | 156..177 | 9/20 (45%) | |||
| leucine-rich repeat | 157..180 | CDD:275380 | 10/22 (45%) | ||
| LRR 6 | 180..201 | 8/68 (12%) | |||
| leucine-rich repeat | 181..204 | CDD:275380 | 10/70 (14%) | ||
| LRR 7 | 204..225 | 9/46 (20%) | |||
| leucine-rich repeat | 205..228 | CDD:275380 | 11/48 (23%) | ||
| LRR 8 | 228..249 | 8/20 (40%) | |||
| leucine-rich repeat | 229..252 | CDD:275380 | 8/22 (36%) | ||
| LRRCT | 261..311 | CDD:214507 | 15/56 (27%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 286..390 | 27/142 (19%) | |||
| PHA03247 | 289..>369 | CDD:223021 | 19/93 (20%) | ||
| Important for interaction with MAG. /evidence=ECO:0000269|PubMed:19420245 | 315..327 | 1/11 (9%) |