Protein Alignment trn and Gp5

DIOPT Version :10

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: NP_036927.2
• Gene: Gp5 / 25259
• RGDID: 2724
• Length: 567
• Species: Rattus norvegicus
• Alignment Length: 500
• Identity: 132/500 - (26%)
• Similarity: 203/500 - (40%)
• Gaps: 90/500 - (18%)

  Fly     6 MIAFVGIWCILASIGVEPAAGLANCPPGCQC---DDNTLVVQCGEGQL-DVLPIALNPSIQRLVI 66
            |:..|.:..:|:.:|.:|..    ||..|:|   |    .|||..|.: .:..:.|..::..:::
  Rat     1 MLRSVLLSAVLSLVGAQPFP----CPKTCKCVVRD----AVQCSGGSVAHIAELGLPTNLTHILL 57

  Fly    67 KSNKIKTIDS-SIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLS 130
            .......:.| |......|..|.||.:|:..|...||....||:.:.|..|||..:.......:.
  Rat    58 FRMDRGVLQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMV 122

  Fly   131 AVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPD 195
            .:..|.|..|.:.:|.|..|..||.:.:|.|.:|::.:|....|..|.:|::|.|..|.||.:|.
  Rat   123 LLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQ 187

  Fly   196 PVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSD 260
            .:: .|...|.:|.|..|.|.|:.:....:|..||.|.|:...||:|:..:|..|..|..|.||.
  Rat   188 GLL-GAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSG 251

  Fly   261 NRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGN 325
            |.|:.:|......:..:.:|:|.:|..|.:.|..|..:..|:.|.:||. .|:.:...||.:...
  Rat   252 NLLESLPPALFLHVSCVTRLTLFENPLEELPEVLFGEMAGLRELWLNGT-HLRTLPAAAFRNLSG 315

  Fly   326 LEYLNLSSNKMLL------------------------EVQEGALSGLSQLKHVVLKANALTSLAE 366
            |:.|.|:.|.:|.                        |:.|.||.||.:|:.|.|:.|.|.:|..
  Rat   316 LQTLGLTRNPLLSALPRGMFHGLTELRVLALHTNALEELPEDALRGLGRLRQVSLRHNRLRALPR 380

  Fly   367 GLF-----------PWKDLQTLD--------------LSENPLSCDCR----VMWL-HNLLVAKN 401
            .||           ....|:||.              |..||..|||.    :.|| |:|
  Rat   381 TLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRVLLGHNPWLCDCGLWPFLQWLRHHL----- 440

  Fly   402 ASQDDVSELL-------CEFPERLRGESLRHLNPAMMGCTHADPR 439
                   |||       |..||.....:...|......|  .|||
  Rat   441 -------ELLGRDEPPQCNGPESRASLTFWELLQGDQWC--PDPR 476

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	2/18 (11%)
		LRR	82..406	CDD:443914	104/377 (28%)
		leucine-rich repeat	84..107	CDD:275380	8/22 (36%)
		leucine-rich repeat	108..131	CDD:275380	5/22 (23%)
		leucine-rich repeat	132..155	CDD:275380	7/22 (32%)
		leucine-rich repeat	156..179	CDD:275380	6/22 (27%)
		leucine-rich repeat	180..204	CDD:275380	8/23 (35%)
		leucine-rich repeat	205..228	CDD:275380	7/22 (32%)
		leucine-rich repeat	229..252	CDD:275380	9/22 (41%)
		leucine-rich repeat	253..276	CDD:275380	7/22 (32%)
		leucine-rich repeat	277..300	CDD:275380	6/22 (27%)
		leucine-rich repeat	301..322	CDD:275380	7/20 (35%)
		leucine-rich repeat	326..350	CDD:275380	11/47 (23%)
		leucine-rich repeat	351..373	CDD:275380	8/32 (25%)
		LRRCT	382..434	CDD:214507	16/63 (25%)
Gp5	NP_036927.2	LRR_8	<64..110	CDD:404697	14/45 (31%)
		LRR 1	75..96		8/20 (40%)
		leucine-rich repeat	76..99	CDD:275380	8/22 (36%)
		LRR	95..424	CDD:443914	89/330 (27%)
		LRR 2	99..120		6/20 (30%)
		leucine-rich repeat	100..123	CDD:275380	5/22 (23%)
		LRR 3	123..144		6/20 (30%)
		leucine-rich repeat	124..147	CDD:275380	7/22 (32%)
		LRR 4	147..168		5/20 (25%)
		leucine-rich repeat	148..171	CDD:275380	6/22 (27%)
		LRR 5	171..193		7/22 (32%)
		leucine-rich repeat	172..195	CDD:275380	8/23 (35%)
		LRR 6	195..216		6/20 (30%)
		leucine-rich repeat	196..219	CDD:275380	7/22 (32%)
		LRR 7	219..240		8/20 (40%)
		leucine-rich repeat	220..243	CDD:275380	9/22 (41%)
		LRR 8	243..264		7/20 (35%)
		leucine-rich repeat	244..267	CDD:275380	7/22 (32%)
		LRR 9	267..288		6/20 (30%)
		leucine-rich repeat	268..291	CDD:275380	6/22 (27%)
		LRR 10	291..312		7/21 (33%)
		leucine-rich repeat	292..315	CDD:275380	7/23 (30%)
		LRR 11	315..337		5/21 (24%)
		leucine-rich repeat	316..338	CDD:275380	5/21 (24%)
		LRR 12	340..361		4/20 (20%)
		leucine-rich repeat	341..364	CDD:275380	6/22 (27%)
		LRR 13	364..385		8/20 (40%)
		leucine-rich repeat	365..388	CDD:275380	8/22 (36%)
		LRR 14	388..409		3/20 (15%)
		leucine-rich repeat	389..410	CDD:275380	3/20 (15%)
		PCC	394..>458	CDD:188093	19/75 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	474..499		2/2 (100%)