| Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_775594.1 | Gene: | Lrit2 / 239038 | MGIID: | 2444885 | Length: | 549 | Species: | Mus musculus |
| Alignment Length: | 498 | Identity: | 107/498 - (21%) |
|---|---|---|---|
| Similarity: | 167/498 - (33%) | Gaps: | 165/498 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 149 TFTPLLKIEELNLGENRIGYLDPKAF-DGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGM 212
Fly 213 NTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRL 277
Fly 278 EQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQE 342
Fly 343 GALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDV 407
Fly 408 ---SELLCEFPERLRGESLRHLNPAM-MGCTHADPRKQALIGALLVGSAATITALALVLYRCRHK 468
Fly 469 IRETIKGGLWGNSALGRKEREYQKTFCDEDYMSRHQHHPCSLGIHSTFPNTYTAPHHPGAT-HHY 532
Fly 533 GMCPMPVNDLGAIDPQQKFQQLVVPTATMISEKKLNNNKALVSQGAIDDSASFV-LHMKSATMGR 596
Fly 597 DVHQQNPQLNHYTKPQFLSATATVGDSCYSYADVPM----VHG 635 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | |
| LRR_8 | 83..142 | CDD:290566 | |||
| leucine-rich repeat | 84..107 | CDD:275380 | |||
| leucine-rich repeat | 108..131 | CDD:275380 | |||
| LRR_RI | 129..421 | CDD:238064 | 68/275 (25%) | ||
| LRR_8 | 132..190 | CDD:290566 | 11/41 (27%) | ||
| leucine-rich repeat | 132..155 | CDD:275380 | 1/5 (20%) | ||
| leucine-rich repeat | 156..179 | CDD:275380 | 5/23 (22%) | ||
| leucine-rich repeat | 180..204 | CDD:275380 | 5/23 (22%) | ||
| LRR_8 | 203..263 | CDD:290566 | 22/59 (37%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 8/22 (36%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
| LRR_8 | 252..308 | CDD:290566 | 18/55 (33%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 11/22 (50%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 301..322 | CDD:275380 | 4/20 (20%) | ||
| LRR_8 | 325..384 | CDD:290566 | 6/58 (10%) | ||
| leucine-rich repeat | 326..350 | CDD:275380 | 1/23 (4%) | ||
| leucine-rich repeat | 351..373 | CDD:275380 | 2/21 (10%) | ||
| Lrit2 | NP_775594.1 | LRR_8 | 56..115 | CDD:290566 | 20/62 (32%) |
| leucine-rich repeat | 57..80 | CDD:275378 | 7/26 (27%) | ||
| LRR_4 | 80..119 | CDD:289563 | 15/38 (39%) | ||
| leucine-rich repeat | 81..104 | CDD:275378 | 8/22 (36%) | ||
| LRR_8 | 103..163 | CDD:290566 | 21/59 (36%) | ||
| leucine-rich repeat | 105..128 | CDD:275378 | 7/22 (32%) | ||
| LRR_4 | 129..164 | CDD:289563 | 14/34 (41%) | ||
| leucine-rich repeat | 129..152 | CDD:275378 | 11/22 (50%) | ||
| leucine-rich repeat | 153..164 | CDD:275378 | 3/10 (30%) | ||
| leucine-rich repeat | 193..204 | CDD:275378 | 5/31 (16%) | ||
| TPKR_C2 | 200..243 | CDD:301599 | 13/44 (30%) | ||
| I-set | 253..344 | CDD:254352 | 23/157 (15%) | ||
| Ig | 266..345 | CDD:299845 | 20/142 (14%) | ||
| fn3 | 367..441 | CDD:278470 | 4/11 (36%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||