Protein Alignment trn and lron-1

DIOPT Version :9

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: NP_510424.4
• Gene: lron-1 / 181553
• WormBaseID: WBGene00008093
• Length: 607
• Species: Caenorhabditis elegans
• Alignment Length: 532
• Identity: 129/532 - (24%)
• Similarity: 203/532 - (38%)
• Gaps: 96/532 - (18%)

  Fly    57 LNPSIQRLVIKSNKIKTI-DSSIQFYAELTFLDLSSNHLMTIPQRTF-AYQKK--LQEVHLNHNK 117
            |..|::.|.|:.|.|..| .|.:....:|..|.|..|.:..:....| :|..:  |.::.|:.|.
 Worm   106 LENSLEELEIRGNYIDGIPQSGVSILKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLKLDLSANN 170

  Fly   118 IGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRI 182
            :..|.....:||..::.|:|..|.:||:.......:..:|:|:||.|||..:...:.. |..|:.
 Worm   171 LTAIHPTGLLGLENLSQLSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHTISRNSLP-LPNLKS 234

  Fly   183 LYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLEL-KGASLRNISHDS 246
            |.|:.|.:..:|.. .|...|.|:.|:||.|.|.||.|..|..:.||..|.: ....:.:|..:.
 Worm   235 LSLEVNQIRLIPSD-SFSETPLLSYLYLGNNLLTSIDASMFLHIGGLKVLSMSNNKDITSIQANG 298

  Fly   247 FLGLQELRI---------------LDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFM 296
            .|.:|:.::               |:|.|..:.||....|.|:..::.:.|.:|....||...|.
 Worm   299 KLSVQQFKLCICILAFQHAPSLIRLELFDCSISRIEPKSLQKVQHIQVILLSRNQITRISHDTFS 363

  Fly   297 GLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANAL 361
            .|.:|..|:::|. .:..|...|||....|..|:||||::...........|.|.|
 Worm   364 NLPELSELDLSGN-SINAVDDFAFSQLPMLTSLDLSSNRLESLPSNVIYDSLMQKK--------- 418

  Fly   362 TSLAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLL-----VAKNASQDDVSELLCEFPERLRGE 421
            ||..:        :.|.:..||..||..:|||...|     |...||....::  |..|..|.|.
 Worm   419 TSPVQ--------RKLSIQNNPWRCDKDLMWLRKWLRDNGDVTTAASNSPPAK--CWTPSNLSGL 473

  Fly   422 SLRHLNPAMMGCT-----------------------------HADPRKQALIGALLVGSAATITA 457
            .||..:..:...|                             |.:....||:| |::|....:..
 Worm   474 DLRQTDSKLPHKTTKPPVDQFQYKNQQVTNSNGTSQLGYQNPHTEVNGLALVG-LILGIVLVVFV 537

  Fly   458 LALVL-YRCRH-------KIRETIKGGLWGNSALGRKEREYQKTFCDEDYMSRHQHHPCSLGIHS 514
            ..::| |..|.       |.:..:.|....:|...|.......|...||:     .||.|..
 Worm   538 SCIILGYLMRFIFLSYEAKTKPNVFGSTISSSGCIRNMYGGDGTLVSEDH-----GHPSSAN--- 594

  Fly   515 TFPNTY-TAPHH 525
              .|.| ..|.|
 Worm   595 --NNVYLNRPRH 604

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	6/18 (33%)
		LRR_8	83..142	CDD:290566	15/61 (25%)
		leucine-rich repeat	84..107	CDD:275380	6/23 (26%)
		leucine-rich repeat	108..131	CDD:275380	6/22 (27%)
		LRR_RI	129..421	CDD:238064	83/312 (27%)
		LRR_8	132..190	CDD:290566	17/57 (30%)
		leucine-rich repeat	132..155	CDD:275380	5/22 (23%)
		leucine-rich repeat	156..179	CDD:275380	8/22 (36%)
		leucine-rich repeat	180..204	CDD:275380	6/23 (26%)
		LRR_8	203..263	CDD:290566	20/75 (27%)
		leucine-rich repeat	205..228	CDD:275380	10/22 (45%)
		leucine-rich repeat	229..252	CDD:275380	4/23 (17%)
		LRR_8	252..308	CDD:290566	15/70 (21%)
		leucine-rich repeat	253..276	CDD:275380	7/37 (19%)
		leucine-rich repeat	277..300	CDD:275380	6/22 (27%)
		leucine-rich repeat	301..322	CDD:275380	6/20 (30%)
		LRR_8	325..384	CDD:290566	13/58 (22%)
		leucine-rich repeat	326..350	CDD:275380	7/23 (30%)
		leucine-rich repeat	351..373	CDD:275380	3/21 (14%)
lron-1	NP_510424.4	PRK15370	<58..>289	CDD:185268	53/184 (29%)
		leucine-rich repeat	85..109	CDD:275380	1/2 (50%)
		leucine-rich repeat	110..133	CDD:275380	6/22 (27%)
		leucine-rich repeat	134..157	CDD:275380	6/22 (27%)
		leucine-rich repeat	161..184	CDD:275380	6/22 (27%)
		leucine-rich repeat	185..208	CDD:275380	5/22 (23%)
		leucine-rich repeat	209..231	CDD:275380	8/22 (36%)
		leucine-rich repeat	232..255	CDD:275380	6/23 (26%)
		leucine-rich repeat	256..279	CDD:275380	10/22 (45%)
		leucine-rich repeat	280..319	CDD:275380	5/38 (13%)
		leucine-rich repeat	320..343	CDD:275380	7/22 (32%)
		LRR_8	343..402	CDD:338972	19/59 (32%)
		leucine-rich repeat	344..367	CDD:275380	6/22 (27%)
		leucine-rich repeat	368..391	CDD:275380	7/23 (30%)
		leucine-rich repeat	392..410	CDD:275380	6/17 (35%)
		leucine-rich repeat	414..435	CDD:275378	8/37 (22%)
		LRRCT	431..>472	CDD:214507	14/42 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D187891at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920