Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032542.1 | Gene: | Lrrn1 / 16979 | MGIID: | 106038 | Length: | 716 | Species: | Mus musculus |
Alignment Length: | 420 | Identity: | 116/420 - (27%) |
---|---|---|---|
Similarity: | 187/420 - (44%) | Gaps: | 57/420 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 ANCPPGCQCD-----------DNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKI-KTIDSSIQF 80
Fly 81 YAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISEL 145
Fly 146 HQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFL 210
Fly 211 GMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLV 275
Fly 276 RLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEV 340
Fly 341 QEGALSGLSQLKHVVLKANALTSL----AEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKN 401
Fly 402 ASQDDVS-----ELLCEFPERLRGESLRHL 426 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 8/18 (44%) |
LRR_8 | 83..142 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 4/22 (18%) | ||
LRR_RI | 129..421 | CDD:238064 | 87/300 (29%) | ||
LRR_8 | 132..190 | CDD:290566 | 21/57 (37%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 203..263 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 252..308 | CDD:290566 | 19/55 (35%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 7/20 (35%) | ||
LRR_8 | 325..384 | CDD:290566 | 14/62 (23%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 7/25 (28%) | ||
Lrrn1 | NP_032542.1 | LRR_RI | 11..273 | CDD:238064 | 79/268 (29%) |
leucine-rich repeat | 54..73 | CDD:275380 | 5/18 (28%) | ||
LRR 1 | 73..95 | 9/21 (43%) | |||
leucine-rich repeat | 74..96 | CDD:275380 | 9/22 (41%) | ||
LRR 2 | 96..117 | 10/44 (23%) | |||
leucine-rich repeat | 97..120 | CDD:275380 | 11/46 (24%) | ||
LRR_8 | 119..179 | CDD:290566 | 21/59 (36%) | ||
LRR 3 | 120..141 | 8/20 (40%) | |||
leucine-rich repeat | 121..144 | CDD:275380 | 9/22 (41%) | ||
LRR 4 | 144..165 | 6/20 (30%) | |||
leucine-rich repeat | 145..168 | CDD:275380 | 8/22 (36%) | ||
LRR 5 | 168..189 | 7/21 (33%) | |||
leucine-rich repeat | 169..192 | CDD:275380 | 7/23 (30%) | ||
LRR 6 | 192..213 | 6/20 (30%) | |||
leucine-rich repeat | 193..216 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 211..>376 | CDD:238064 | 48/167 (29%) | ||
LRR_8 | 215..275 | CDD:290566 | 19/59 (32%) | ||
LRR 7 | 216..237 | 5/20 (25%) | |||
leucine-rich repeat | 217..240 | CDD:275380 | 7/22 (32%) | ||
LRR 8 | 240..261 | 7/20 (35%) | |||
leucine-rich repeat | 241..264 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 263..323 | CDD:290566 | 17/59 (29%) | ||
LRR 9 | 264..285 | 8/20 (40%) | |||
leucine-rich repeat | 265..288 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 289..313 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 312..373 | CDD:290566 | 14/63 (22%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 339..362 | CDD:275378 | 7/25 (28%) | ||
leucine-rich repeat | 363..375 | CDD:275378 | 4/11 (36%) | ||
LRRCT | 371..419 | CDD:214507 | 12/50 (24%) | ||
I-set | 429..516 | CDD:254352 | |||
Ig | 431..516 | CDD:299845 | |||
fn3 | 531..600 | CDD:278470 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 692..716 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 159 | 1.000 | Inparanoid score | I4234 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm8753 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103993 | |
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.960 |