Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011528235.1 | Gene: | CHADL / 150356 | HGNCID: | 25165 | Length: | 830 | Species: | Homo sapiens |
Alignment Length: | 771 | Identity: | 158/771 - (20%) |
---|---|---|---|
Similarity: | 219/771 - (28%) | Gaps: | 344/771 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 GVEPAAGLANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPS-----------IQRLVIKSNKIKT 73
Fly 74 IDSS-----------------IQFYAE--------LTFLDLSSNHLMTIPQRTFAYQKKLQEVHL 113
Fly 114 NHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLS 178
Fly 179 QLRILYLDDNALTTVPDPVIFQ-----------------------AMPSLAELFLGMNTLQSIQA 220
Fly 221 DAFQ--------DLKG--------------LTRLELKG--------------------------- 236
Fly 237 ---ASLRNISHDSF--------------------------------------------------- 247
Fly 248 ------------LGLQ--------ELRILDLSDNRLDRIPSV---GLSKLV-------------- 275
Fly 276 -------RLEQLSLGQNDFEVIS----EGA----FMGLKQLKRLEVNGAL--------------- 310
Fly 311 ------------------------RLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQL 351
Fly 352 KHVVLKANALTSLAEGLF----------------------------------------------- 369
Fly 370 --PWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVSELLCEFPERLRGESLRHLNPAMMG 432
Fly 433 CTHADPRKQALIGALLVGSAATITALALVLYRCRHKIRET-IKGGLWGNSALGRKE 487 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 6/34 (18%) |
LRR_8 | 83..142 | CDD:290566 | 21/66 (32%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | 129..421 | CDD:238064 | 115/557 (21%) | ||
LRR_8 | 132..190 | CDD:290566 | 21/57 (37%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 11/46 (24%) | ||
LRR_8 | 203..263 | CDD:290566 | 27/182 (15%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 10/30 (33%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 11/123 (9%) | ||
LRR_8 | 252..308 | CDD:290566 | 21/87 (24%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 9/30 (30%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 8/59 (14%) | ||
LRR_8 | 325..384 | CDD:290566 | 25/107 (23%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 13/23 (57%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 7/70 (10%) | ||
CHADL | XP_011528235.1 | leucine-rich repeat | 132..155 | CDD:275380 | 6/22 (27%) |
LRR_RI | <133..358 | CDD:238064 | 63/224 (28%) | ||
LRR_8 | 133..214 | CDD:290566 | 20/80 (25%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 180..203 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 204..227 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 228..286 | CDD:290566 | 21/57 (37%) | ||
leucine-rich repeat | 228..251 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 252..275 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 276..299 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 300..323 | CDD:275380 | 1/22 (5%) | ||
LRR_8 | 322..380 | CDD:290566 | 17/57 (30%) | ||
leucine-rich repeat | 324..347 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 346..>380 | CDD:289563 | 8/33 (24%) | ||
LRRNT | 463..497 | CDD:214470 | 3/33 (9%) | ||
leucine-rich repeat | 478..494 | CDD:275380 | 3/15 (20%) | ||
LRR_RI | 492..671 | CDD:238064 | 42/179 (23%) | ||
leucine-rich repeat | 495..518 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 518..577 | CDD:290566 | 12/58 (21%) | ||
leucine-rich repeat | 519..542 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 543..566 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 565..625 | CDD:290566 | 5/59 (8%) | ||
leucine-rich repeat | 567..590 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 591..614 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 615..638 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 637..698 | CDD:290566 | 20/61 (33%) | ||
leucine-rich repeat | 639..662 | CDD:275380 | 13/23 (57%) | ||
leucine-rich repeat | 663..687 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 686..745 | CDD:290566 | 5/58 (9%) | ||
leucine-rich repeat | 688..712 | CDD:275380 | 0/23 (0%) | ||
LRR_4 | 711..>744 | CDD:289563 | 4/32 (13%) | ||
LRRCT | 743..791 | CDD:214507 | 13/51 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |