Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_848663.1 | Gene: | RTN4RL1 / 146760 | HGNCID: | 21329 | Length: | 441 | Species: | Homo sapiens |
Alignment Length: | 580 | Identity: | 124/580 - (21%) |
---|---|---|---|
Similarity: | 182/580 - (31%) | Gaps: | 229/580 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 ILASIGVE-PAAGLANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSI 78
Fly 79 QFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQIS 143
Fly 144 ELHQGTFTPLLKIEELNLGENR-IGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAE 207
Fly 208 LFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLS 272
Fly 273 KLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKML 337
Fly 338 LEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVM----WLHNLLV 398
Fly 399 AKNASQDDVSELLCEFPERLRGESLRHLNPA-MMGCTHADPRKQALIGALLVGSAATITALALVL 462
Fly 463 YRCRHKIRETIKGGLWGNSALGRKEREYQKTFCDEDYMSRHQHHPCSLGIHSTFPNTYTAPHHPG 527
Fly 528 AT--HHYG----------MCPMP-----VNDLG-----------AIDPQQKFQQLVVPTA 559 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 2/17 (12%) |
LRR_8 | 83..142 | CDD:290566 | 9/58 (16%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | 129..421 | CDD:238064 | 75/296 (25%) | ||
LRR_8 | 132..190 | CDD:290566 | 22/58 (38%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 12/23 (52%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 203..263 | CDD:290566 | 17/59 (29%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 252..308 | CDD:290566 | 11/55 (20%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 1/22 (5%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 2/20 (10%) | ||
LRR_8 | 325..384 | CDD:290566 | 11/58 (19%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 4/23 (17%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 3/21 (14%) | ||
RTN4RL1 | NP_848663.1 | leucine-rich repeat | 37..54 | CDD:275380 | 3/31 (10%) |
LRR 1 | 55..76 | 8/54 (15%) | |||
LRR_8 | 57..111 | CDD:316378 | 18/55 (33%) | ||
leucine-rich repeat | 57..77 | CDD:275380 | 6/21 (29%) | ||
LRR 2 | 77..98 | 7/20 (35%) | |||
leucine-rich repeat | 78..101 | CDD:275380 | 6/22 (27%) | ||
LRR 3 | 101..123 | 10/21 (48%) | |||
leucine-rich repeat | 102..126 | CDD:275380 | 12/23 (52%) | ||
LRR_8 | 126..185 | CDD:316378 | 22/59 (37%) | ||
LRR 4 | 126..147 | 8/21 (38%) | |||
leucine-rich repeat | 127..150 | CDD:275380 | 8/23 (35%) | ||
LRR 5 | 150..171 | 8/20 (40%) | |||
leucine-rich repeat | 151..174 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 174..233 | CDD:316378 | 19/108 (18%) | ||
LRR 6 | 174..195 | 6/20 (30%) | |||
leucine-rich repeat | 175..198 | CDD:275380 | 8/46 (17%) | ||
LRR 7 | 198..219 | 6/20 (30%) | |||
leucine-rich repeat | 199..222 | CDD:275380 | 7/22 (32%) | ||
LRR 8 | 222..243 | 8/69 (12%) | |||
leucine-rich repeat | 223..246 | CDD:275380 | 9/71 (13%) | ||
TPKR_C2 | 255..300 | CDD:326558 | 13/51 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 304..382 | 19/139 (14%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 397..417 | 124/580 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 49 | 1.000 | Domainoid score | I11786 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.010 |