Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001352873.1 | Gene: | elfn2a / 103909578 | ZFINID: | ZDB-GENE-080327-26 | Length: | 933 | Species: | Danio rerio |
Alignment Length: | 750 | Identity: | 161/750 - (21%) |
---|---|---|---|
Similarity: | 251/750 - (33%) | Gaps: | 234/750 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 96 TIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELN 160
Fly 161 LGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQD 225
Fly 226 LKG-LTRLELKGASLRNISH---DSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLS----L 282
Fly 283 GQNDFEVIS----EGAFMGLKQLKRLEVNGALRLKRVMTGA------------------------ 319
Fly 320 -FSDNGNLEYLNLSSNKMLLEVQE--GALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSE 381
Fly 382 NPLSCDCRVMWLHNLLVAKNASQDDVSELLCEFPERLRG-ESLR-------HLNPAMMGCTHADP 438
Fly 439 RKQALIGALLVGSAATITALALVLYRCRHK-----------IRETIKGGLWG--NSALGRKEREY 490
Fly 491 QKTFCDEDYMSRHQHH--------PCSLGIHSTFPNT--------------YTAPHHPGATH--H 531
Fly 532 YGMCPMPVNDLGAIDPQQKFQQLVVPTATMISEKKLNNNKALVSQGAID-------DSASFVLHM 589
Fly 590 KSATMGRDVHQQNPQLNHYTKPQFL---------SATATVGDSCYSYADVPMVHGAPLGGPNQPQ 645
Fly 646 LRLTQEHFKQRELYDQEMGSEILDHNYIYSNTHYSMPL--------EQLGRSKTPTPPPMPPALP 702
Fly 703 L--RNGLC--------------ATTGRRSFQQKSA 721 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | |
LRR_8 | 83..142 | CDD:290566 | 14/45 (31%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 4/10 (40%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 5/22 (23%) | ||
LRR_RI | 129..421 | CDD:238064 | 70/331 (21%) | ||
LRR_8 | 132..190 | CDD:290566 | 20/57 (35%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 4/23 (17%) | ||
LRR_8 | 203..263 | CDD:290566 | 21/63 (33%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 8/25 (32%) | ||
LRR_8 | 252..308 | CDD:290566 | 11/63 (17%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 6/30 (20%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 2/45 (4%) | ||
LRR_8 | 325..384 | CDD:290566 | 10/60 (17%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 4/25 (16%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 2/21 (10%) | ||
elfn2a | NP_001352873.1 | leucine-rich repeat | 72..92 | CDD:275378 | 5/19 (26%) |
LRR_8 | 91..151 | CDD:316378 | 20/59 (34%) | ||
leucine-rich repeat | 93..116 | CDD:275378 | 9/22 (41%) | ||
leucine-rich repeat | 117..140 | CDD:275378 | 7/22 (32%) | ||
leucine-rich repeat | 141..163 | CDD:275378 | 4/22 (18%) | ||
leucine-rich repeat | 165..189 | CDD:275380 | 8/23 (35%) | ||
TPKR_C2 | 198..>234 | CDD:326558 | 8/35 (23%) | ||
FN3 | 306..372 | CDD:328772 | 14/79 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |