Protein Alignment trn and lrrc4bb

DIOPT Version :9

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_003201401.1
• Gene: lrrc4bb / 100535350
• ZFINID: ZDB-GENE-091116-44
• Length: 726
• Species: Danio rerio
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380
		LRR_8	83..142	CDD:290566
		leucine-rich repeat	84..107	CDD:275380
		leucine-rich repeat	108..131	CDD:275380
		LRR_RI	129..421	CDD:238064
		LRR_8	132..190	CDD:290566
		leucine-rich repeat	132..155	CDD:275380
		leucine-rich repeat	156..179	CDD:275380
		leucine-rich repeat	180..204	CDD:275380
		LRR_8	203..263	CDD:290566
		leucine-rich repeat	205..228	CDD:275380
		leucine-rich repeat	229..252	CDD:275380
		LRR_8	252..308	CDD:290566
		leucine-rich repeat	253..276	CDD:275380
		leucine-rich repeat	277..300	CDD:275380
		leucine-rich repeat	301..322	CDD:275380
		LRR_8	325..384	CDD:290566
		leucine-rich repeat	326..350	CDD:275380
		leucine-rich repeat	351..373	CDD:275380
lrrc4bb	XP_003201401.1	LRRNT	38..72	CDD:214470
		LRR_8	68..128	CDD:290566
		leucine-rich repeat	70..93	CDD:275380
		LRR_RI	85..293	CDD:238064
		leucine-rich repeat	94..117	CDD:275380
		leucine-rich repeat	118..141	CDD:275380
		LRR_8	140..196	CDD:290566
		leucine-rich repeat	142..165	CDD:275380
		leucine-rich repeat	166..190	CDD:275380
		leucine-rich repeat	191..212	CDD:275380
		LRR_8	212..271	CDD:290566
		leucine-rich repeat	213..236	CDD:275380
		leucine-rich repeat	237..260	CDD:275380
		leucine-rich repeat	261..282	CDD:275380
		TPKR_C2	293..343	CDD:301599
		IG_like	352..435	CDD:214653
		Ig	360..435	CDD:299845

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910