Protein Alignment trn and lrrc15

DIOPT Version :9

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_031758235.1
• Gene: lrrc15 / 100496322
• XenbaseID: XB-GENE-990725
• Length: 588
• Species: Xenopus tropicalis
• Alignment Length: 439
• Identity: 119/439 - (27%)
• Similarity: 193/439 - (43%)
• Gaps: 66/439 - (15%)

  Fly    30 CPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSI-QFYAELTFLDLSSNH 93
            ||..|.| .....|.|...::.|:|..:..:|:.|.|.:.::..:.:.| |....|..|.:..|.
 Frog    23 CPSDCIC-PRPGQVDCSGPEVLVIPDNIPQNIRTLQIVNTEVTELPNGILQNMTALLILRIEKNE 86

  Fly    94 LMTIPQRTF----------AYQKKLQEVH--------------LNHNKIGQISNKTFIGLSAVTV 134
            |.|:....|          ....||||:|              |::|:|.||....|..||.|..
 Frog    87 LSTVGSTAFHNLISLRYLSLANNKLQELHGNLFKDLAKLETLILSNNQINQIHPSLFTALSNVKD 151

  Fly   135 LNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVI- 198
            |.:.||.:..:..|.|..:..:.:|||.:|.|.||.|:|||.|::|:.|.|.:|.|..:|...:
 Frog   152 LQMVGNNLESIPVGAFDQMSGLLKLNLAKNSIKYLPPQAFDKLAKLQTLRLYENQLQDIPAGFLK 216

  Fly   199 ----------------------FQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRN 241
                                  |...|.|.::||..|.:.|:....|.:|..:|:|.|.|.:||.
 Frog   217 KLSSLQEVALHSNKLIELSTDTFSGNPYLQKVFLSNNEIDSLPRGIFLNLPEITKLTLYGNALRE 281

  Fly   242 ISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEV 306
            ::...|..:.:|:.|.|.||:|:::.....|.|.....|.:.:|....||..||.||::|:.|.:
 Frog   282 LTTGVFGPMPKLKELWLYDNQLEQLTDNVFSNLTETVLLVISKNKIRSISTHAFCGLEELQELSL 346

  Fly   307 NGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGAL-SGLSQLKHVVLKANALTSLAEGLF- 369
            :..| |..:..........|:.::|.|||  ::...|.| ..:..:.::.|:.|:|..:....|
 Frog   347 HTNL-LTTLDQDVLKCLPKLQNISLHSNK--IQYLPGDLFKNMDTVMNIQLQNNSLEDIPHDFFD 408

  Fly   370 PWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQD------DVSELLC 412
            ....|..:.|.|||..||      ||||..||...:      ::|:|:|
 Frog   409 SLVQLNEVKLYENPWKCD------HNLLSLKNWLSENMNKLGNLSQLVC 451

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	3/18 (17%)
		LRR_8	83..142	CDD:290566	23/82 (28%)
		leucine-rich repeat	84..107	CDD:275380	6/32 (19%)
		leucine-rich repeat	108..131	CDD:275380	11/36 (31%)
		LRR_RI	129..421	CDD:238064	89/315 (28%)
		LRR_8	132..190	CDD:290566	22/57 (39%)
		leucine-rich repeat	132..155	CDD:275380	6/22 (27%)
		leucine-rich repeat	156..179	CDD:275380	12/22 (55%)
		leucine-rich repeat	180..204	CDD:275380	7/46 (15%)
		LRR_8	203..263	CDD:290566	20/59 (34%)
		leucine-rich repeat	205..228	CDD:275380	7/22 (32%)
		leucine-rich repeat	229..252	CDD:275380	7/22 (32%)
		LRR_8	252..308	CDD:290566	18/55 (33%)
		leucine-rich repeat	253..276	CDD:275380	8/22 (36%)
		leucine-rich repeat	277..300	CDD:275380	8/22 (36%)
		leucine-rich repeat	301..322	CDD:275380	4/20 (20%)
		LRR_8	325..384	CDD:290566	15/60 (25%)
		leucine-rich repeat	326..350	CDD:275380	7/24 (29%)
		leucine-rich repeat	351..373	CDD:275380	4/22 (18%)
lrrc15	XP_031758235.1	leucine-rich repeat	35..51	CDD:275380	4/15 (27%)
		LRR_8	51..111	CDD:404697	11/59 (19%)
		leucine-rich repeat	54..76	CDD:275380	4/21 (19%)
		leucine-rich repeat	77..100	CDD:275380	6/22 (27%)
		internalin_A	98..>449	CDD:380193	98/359 (27%)
		leucine-rich repeat	101..124	CDD:275380	5/22 (23%)
		leucine-rich repeat	125..148	CDD:275380	7/22 (32%)
		leucine-rich repeat	149..172	CDD:275380	6/22 (27%)
		leucine-rich repeat	173..196	CDD:275380	12/22 (55%)
		leucine-rich repeat	197..220	CDD:275380	6/22 (27%)
		leucine-rich repeat	221..244	CDD:275380	1/22 (5%)
		leucine-rich repeat	245..268	CDD:275380	7/22 (32%)
		leucine-rich repeat	269..292	CDD:275380	7/22 (32%)
		leucine-rich repeat	293..316	CDD:275380	8/22 (36%)
		leucine-rich repeat	317..340	CDD:275380	8/22 (36%)
		leucine-rich repeat	341..362	CDD:275380	4/21 (19%)
		leucine-rich repeat	365..388	CDD:275380	7/24 (29%)
		leucine-rich repeat	389..410	CDD:275380	4/20 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm47585
Panther	1	1.100	-	-	O	PTHR24373
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.100