Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002938357.1 | Gene: | lrrn1 / 100492182 | XenbaseID: | XB-GENE-18030784 | Length: | 718 | Species: | Xenopus tropicalis |
Alignment Length: | 441 | Identity: | 124/441 - (28%) |
---|---|---|---|
Similarity: | 196/441 - (44%) | Gaps: | 56/441 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 ILASIGVEPAAGLANCPPGCQCD-----------DNTLVVQCGEGQLDVLPIALNPSIQRLVIKS 68
Fly 69 NKIKTIDSSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVT 133
Fly 134 VLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVI 198
Fly 199 FQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRL 263
Fly 264 DRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEY 328
Fly 329 LNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGL---FPWKDLQTLDLSENPLSCDCRV 390
Fly 391 MWLHNLLVAKNASQDDVS-----ELLCEFPERLRGESLRHL---NPAMMGC 433 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 5/17 (29%) |
LRR_8 | 83..142 | CDD:290566 | 17/58 (29%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 4/22 (18%) | ||
LRR_RI | 129..421 | CDD:238064 | 91/299 (30%) | ||
LRR_8 | 132..190 | CDD:290566 | 20/57 (35%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 203..263 | CDD:290566 | 22/59 (37%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 252..308 | CDD:290566 | 19/55 (35%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 7/20 (35%) | ||
LRR_8 | 325..384 | CDD:290566 | 15/61 (25%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 8/24 (33%) | ||
lrrn1 | XP_002938357.1 | LRRNT | 33..76 | CDD:214470 | 9/42 (21%) |
LRR | <70..350 | CDD:227223 | 92/304 (30%) | ||
leucine-rich repeat | 75..97 | CDD:275378 | 6/21 (29%) | ||
leucine-rich repeat | 98..121 | CDD:275380 | 12/46 (26%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 290..314 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 315..336 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 340..363 | CDD:275378 | 8/24 (33%) | ||
leucine-rich repeat | 364..376 | CDD:275378 | 4/11 (36%) | ||
LRRCT | 372..418 | CDD:214507 | 12/52 (23%) | ||
I-set | 431..518 | CDD:369462 | |||
fn3 | 538..602 | CDD:365830 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I11458 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 166 | 1.000 | Inparanoid score | I4049 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm14097 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.960 |