Protein Alignment trn and tlrs5

DIOPT Version :9

• Sequence 1: NP_001261796.1
• Gene: trn / 39491
• FlyBaseID: FBgn0010452
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_002937550.2
• Gene: tlrs5 / 100489423
• XenbaseID: XB-GENE-22201327
• Length: 653
• Species: Xenopus tropicalis
• Alignment Length: 433
• Identity: 119/433 - (27%)
• Similarity: 180/433 - (41%)
• Gaps: 70/433 - (16%)

  Fly    32 PGCQCDDNTLVVQCGEGQLDVLPIALNPS-IQRLV----------IKSNKIKTIDSSIQFY---- 81
            |.|....|.:.:    |.|||..:..|.. ::..|          ||......:.|...|:
 Frog   225 PHCTNPFNNITL----GTLDVSSMGWNAEMVENFVRTISGTQVDYIKMRHTAGLGSGFGFHNLKD 285

  Fly    82 -----------AELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVL 135
                       :.:..||||:..:..:..:.|:...||..:.|:.|:|.::|:..|.||..:..|
 Frog   286 PNKDTFSGLNSSNVQILDLSNGFISHLVPQLFSAFPKLLSLDLSSNQINRMSSGAFSGLGELVSL 350

  Fly   136 NLRGNQISELHQGTFTPL--LKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVI 198
            ||.||.:.||...:|..|  ..::.|:|..|.||.:...|.|..:.|..|.|.||||..:| |..
 Frog   351 NLSGNLLGELMGSSFQGLGATSLKTLDLSSNHIGAVQYGALDSFTALTSLNLRDNALNKIP-PTK 414

  Fly   199 FQAMPSLAELFLGMNTLQSIQADAFQDLKGL-------TRLELKGASLRNI-SHDSFLGLQELRI 255
            .|.:           |...::.:...|:..:       |.|:|....|.:. |....|.||.|:.
 Frog   415 LQGV-----------TFVLLKQNRISDIYNIISFCPHATILDLSSNRLTDFRSLWQILELQSLKY 468

  Fly   256 LDLSDNRLDRIPSVGLSKLVR---LEQLSLGQNDF-EVISEG----AFMGLKQLKRLEVNGALRL 312
            |.|:.|.|.|......|.:.|   |..|.|..|.. .|:..|    .||.|..||.|.: ...:|
 Frog   469 LSLASNSLYRCSLPHTSNITRTSGLVYLDLSDNALGPVLKSGECGDIFMHLGSLKSLNL-ARNQL 532

  Fly   313 KRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVL-KANALTSLAEGLFPWKDLQT 376
            ..:....|....:|:.|:||.|. ..|:|....:||:.||.:.| |:|.:|..:..|.|...|::
 Frog   533 SNIPDTMFRSLSSLQTLDLSGNG-FKEIQSNLFTGLTALKTLNLGKSNLVTLSSSVLDPLGSLES 596

  Fly   377 LDLSENPLSCDCRV----MWLHNLLVAKNASQDDVSELLCEFP 415
            :||||..|.|||.:    .||.:..|..|..:   .|:||..|
 Frog   597 IDLSEVTLVCDCSLWDFWKWLEDTNVTVNVGK---QEVLCIQP 636

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
trn	NP_001261796.1	leucine-rich repeat	62..80	CDD:275380	4/27 (15%)
		LRR_8	83..142	CDD:290566	19/58 (33%)
		leucine-rich repeat	84..107	CDD:275380	5/22 (23%)
		leucine-rich repeat	108..131	CDD:275380	8/22 (36%)
		LRR_RI	129..421	CDD:238064	93/310 (30%)
		LRR_8	132..190	CDD:290566	21/59 (36%)
		leucine-rich repeat	132..155	CDD:275380	9/24 (38%)
		leucine-rich repeat	156..179	CDD:275380	7/22 (32%)
		leucine-rich repeat	180..204	CDD:275380	10/23 (43%)
		LRR_8	203..263	CDD:290566	14/67 (21%)
		leucine-rich repeat	205..228	CDD:275380	2/22 (9%)
		leucine-rich repeat	229..252	CDD:275380	7/30 (23%)
		LRR_8	252..308	CDD:290566	20/63 (32%)
		leucine-rich repeat	253..276	CDD:275380	7/22 (32%)
		leucine-rich repeat	277..300	CDD:275380	9/27 (33%)
		leucine-rich repeat	301..322	CDD:275380	5/20 (25%)
		LRR_8	325..384	CDD:290566	22/59 (37%)
		leucine-rich repeat	326..350	CDD:275380	9/23 (39%)
		leucine-rich repeat	351..373	CDD:275380	8/22 (36%)
tlrs5	XP_002937550.2	PLN00113	100..>597	CDD:215061	103/389 (26%)
		leucine-rich repeat	108..131	CDD:275380
		leucine-rich repeat	132..157	CDD:275380
		leucine-rich repeat	158..182	CDD:275380
		leucine-rich repeat	183..208	CDD:275380
		leucine-rich repeat	209..232	CDD:275380	2/6 (33%)
		leucine-rich repeat	299..322	CDD:275380	5/22 (23%)
		leucine-rich repeat	323..346	CDD:275380	8/22 (36%)
		leucine-rich repeat	347..372	CDD:275380	9/24 (38%)
		leucine-rich repeat	373..396	CDD:275380	7/22 (32%)
		leucine-rich repeat	397..440	CDD:275380	12/54 (22%)
		leucine-rich repeat	418..431	CDD:275378	1/23 (4%)
		leucine-rich repeat	441..492	CDD:275380	16/50 (32%)
		leucine-rich repeat	493..521	CDD:275380	9/27 (33%)
		leucine-rich repeat	522..545	CDD:275380	5/23 (22%)
		leucine-rich repeat	546..569	CDD:275380	9/23 (39%)
		leucine-rich repeat	570..591	CDD:275380	7/20 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24373
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010