Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017948905.2 | Gene: | flrt1 / 100486965 | XenbaseID: | XB-GENE-495403 | Length: | 679 | Species: | Xenopus tropicalis |
Alignment Length: | 454 | Identity: | 114/454 - (25%) |
---|---|---|---|
Similarity: | 184/454 - (40%) | Gaps: | 107/454 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 NCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKT--IDSSIQFYAELTFLDLSS 91
Fly 92 NHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKI 156
Fly 157 EELNLGENRIG--YLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMP-SLAELFLGMNTLQSI 218
Fly 219 QADAFQDLKGLTRLELKGASLRN--ISHDSFLGLQELRILDLSDNRLD----RIPSVGLSKLVRL 277
Fly 278 EQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQE 342
Fly 343 GALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLD---LSENPLSCDCRVMWLHNLLVAKNASQ 404
Fly 405 DDVSELLCEFPERLRGESLRHLNPAMMGCTHADPRKQALIGALLVGSAATITALALVLYRCRHK 468 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 3/19 (16%) |
LRR_8 | 83..142 | CDD:290566 | 12/58 (21%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 129..421 | CDD:238064 | 84/303 (28%) | ||
LRR_8 | 132..190 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 8/24 (33%) | ||
LRR_8 | 203..263 | CDD:290566 | 26/62 (42%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 11/24 (46%) | ||
LRR_8 | 252..308 | CDD:290566 | 10/59 (17%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 10/26 (38%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 0/20 (0%) | ||
LRR_8 | 325..384 | CDD:290566 | 19/61 (31%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 4/23 (17%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 9/21 (43%) | ||
flrt1 | XP_017948905.2 | PRK15370 | <65..>388 | CDD:185268 | 105/415 (25%) |
leucine-rich repeat | 92..114 | CDD:275378 | 3/21 (14%) | ||
leucine-rich repeat | 115..135 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 136..159 | CDD:275380 | 8/44 (18%) | ||
leucine-rich repeat | 160..185 | CDD:275380 | 7/24 (29%) | ||
leucine-rich repeat | 186..206 | CDD:275380 | 8/24 (33%) | ||
leucine-rich repeat | 207..230 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 231..256 | CDD:275380 | 11/24 (46%) | ||
leucine-rich repeat | 257..278 | CDD:275380 | 7/20 (35%) | ||
leucine-rich repeat | 279..302 | CDD:275380 | 7/78 (9%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 11/24 (46%) | ||
FN3 | 446..510 | CDD:214495 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |