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Protein Alignment trn and tlr13

DIOPT Version :9

Sequence 1:	NP_001261796.1	Gene:	trn / 39491	FlyBaseID:	FBgn0010452	Length:	751	Species:	Drosophila melanogaster
Sequence 2:	XP_002935047.2	Gene:	tlr13 / 100485164	XenbaseID:	XB-GENE-5873547	Length:	948	Species:	Xenopus tropicalis

Alignment Length:	402	Identity:	108/402 - (26%)
Similarity:	179/402 - (44%)	Gaps:	71/402 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    59 PSIQRLVIKSNKIKTID-SSIQFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQIS 122
            |.:|.|.||.:||...: |.|.....||.|.||::.|..:.::.....|.|:.::|:..|:.:|:
Frog   306 PKLQLLDIKHSKIAVTNLSIIGRCTNLTSLILSTSPLPRLQEKDLQDFKYLEVLYLDKCKLRRIA 370

  Fly   123 NKTFIGLSAVTVLNLRGNQISELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGL---------- 177
            |.::.||:.:..|.|..||:|:|....|:||..::.|:|.:|.:.:|:.|||.||
Frog   371 NSSWRGLNNLHTLILERNQLSDLEDKLFSPLTSLQYLDLSKNYLTHLNEKAFSGLRRLNYLSLKG 435

  Fly   178 --------------SQLRILYLDDNALTTVPDPV-IFQAMPSLAELFLGMNTLQSIQADAFQDLK 227
                          |.||:|.|.||:::.:.... |:  :..|..|.|..|.:.:||.:..:.|.
Frog   436 CKITAATRNNFRYFSNLRVLDLQDNSISLIKSNAHIY--LRKLETLLLSGNKILTIQKNGLKGLV 498

  Fly   228 GLTRLELKGASLRNISHDSFLGLQELRILDLSDNRL-------DRIPSVGLSKLVRLEQLSLGQN 285
            .|..|.|...::..|:.::|..::.||.||||.|:|       ...|.:.|::|..|:.....:.
Frog   499 SLKELSLANNNIYKITDNTFKFVKSLRSLDLSRNQLWPLHKFQSPTPFLNLTQLEYLDASYQAEG 563

  Fly   286 DFEVISEGAFMGLKQLKRLEVNG-------------ALRLKRVMTGA----------------FS 321
            :. .|....|.||:.||.|.:.|             .|.|..:...|                |.
Frog   564 NI-YIPASLFQGLQSLKVLRLQGNPSAFFRNVSFEFLLNLTELDISATVYTMTDPPISFEKELFK 627

  Fly   322 DNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLF---PWKDLQTLDLSENP 383
            ..|.|..|.|.:|.:.. :.|...:.:..|:|:.|:.|.||:::|.:.   |  :|...|:..|.
Frog   628 KLGQLRNLTLDNNGIQF-LPEDVFTNVPMLEHISLRYNRLTNISEDILKNVP--NLNYFDMYMNT 689

  Fly   384 LSCDCRVMWLHN 395
            |||.|...|..|
Frog   690 LSCSCDNYWFQN 701

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.