Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017207970.1 | Gene: | LOC100151059 / 100151059 | -ID: | - | Length: | 605 | Species: | Danio rerio |
Alignment Length: | 432 | Identity: | 117/432 - (27%) |
---|---|---|---|
Similarity: | 170/432 - (39%) | Gaps: | 78/432 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 CILASIGVEPAAGLANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSI 78
Fly 79 QFYAELTFLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQIS 143
Fly 144 ELHQGTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAEL 208
Fly 209 FLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSD------------- 260
Fly 261 -----------NRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKR 314
Fly 315 VMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLF-PWKDLQTLD 378
Fly 379 LSENPLSCDCRVMWLHNLLVAKNASQDDVSELLCEFPERLRG 420 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 2/17 (12%) |
LRR_8 | 83..142 | CDD:290566 | 19/58 (33%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 129..421 | CDD:238064 | 89/317 (28%) | ||
LRR_8 | 132..190 | CDD:290566 | 21/57 (37%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 203..263 | CDD:290566 | 18/83 (22%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 252..308 | CDD:290566 | 17/79 (22%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 7/46 (15%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 3/20 (15%) | ||
LRR_8 | 325..384 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 9/23 (39%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 6/22 (27%) | ||
LOC100151059 | XP_017207970.1 | LRRNT | 26..60 | CDD:214470 | 10/34 (29%) |
leucine-rich repeat | 37..56 | CDD:275380 | 4/19 (21%) | ||
leucine-rich repeat | 58..81 | CDD:275380 | 9/44 (20%) | ||
LRR_RI | 61..332 | CDD:238064 | 81/297 (27%) | ||
LRR_8 | 80..140 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 82..105 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 106..129 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 128..188 | CDD:290566 | 18/60 (30%) | ||
leucine-rich repeat | 130..153 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 154..177 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 178..201 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 202..225 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 226..249 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 249..308 | CDD:290566 | 15/84 (18%) | ||
leucine-rich repeat | 250..273 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 274..295 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 297..356 | CDD:290566 | 23/84 (27%) | ||
leucine-rich repeat | 298..321 | CDD:275380 | 12/48 (25%) | ||
leucine-rich repeat | 322..342 | CDD:275380 | 6/19 (32%) | ||
leucine-rich repeat | 346..358 | CDD:275378 | 6/11 (55%) | ||
TPKR_C2 | 354..394 | CDD:301599 | 14/39 (36%) | ||
I-set | 409..499 | CDD:254352 | |||
Ig | 424..492 | CDD:299845 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6410 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.040 |