Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001104232.1 | Gene: | vasnb / 100004428 | ZFINID: | ZDB-GENE-110714-1 | Length: | 668 | Species: | Danio rerio |
Alignment Length: | 731 | Identity: | 153/731 - (20%) |
---|---|---|---|
Similarity: | 240/731 - (32%) | Gaps: | 218/731 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 PAAGLAN-CPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTI-DSSIQFYAELT 85
Fly 86 FLDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQGTF 150
Fly 151 TPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTL 215
Fly 216 QSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQL 280
Fly 281 SLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGAL 345
Fly 346 SGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVSEL 410
Fly 411 LCEFPERLRGESLRHLNPAMMGCTHADPRKQALIGALLVGSAATITALALVLYRCRHKI------ 469
Fly 470 ------------------------RET-------IKGG-LW-------------GNSALGRKERE 489
Fly 490 YQKTFCDED--------------------------YMSRHQH---HPCSLGIHSTF--------- 516
Fly 517 PNTYTAPHH----------PGATHHYGMCPMPVNDLGAID----PQQKFQQLVVPTATMISEKKL 567
Fly 568 NNN-------KALVSQGAIDDSASFVLHMKSATMGRDVHQQNPQLNHY--------TKPQFLSAT 617
Fly 618 ATVGDSCYSYADVPMV 633 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | 3/18 (17%) |
LRR_8 | 83..142 | CDD:290566 | 21/58 (36%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 9/22 (41%) | ||
LRR_RI | 129..421 | CDD:238064 | 73/291 (25%) | ||
LRR_8 | 132..190 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 180..204 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 203..263 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 205..228 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 229..252 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 252..308 | CDD:290566 | 17/55 (31%) | ||
leucine-rich repeat | 253..276 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 277..300 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 301..322 | CDD:275380 | 2/20 (10%) | ||
LRR_8 | 325..384 | CDD:290566 | 14/58 (24%) | ||
leucine-rich repeat | 326..350 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 351..373 | CDD:275380 | 4/21 (19%) | ||
vasnb | NP_001104232.1 | LRR_RI | <51..181 | CDD:238064 | 43/157 (27%) |
LRR_8 | 54..114 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 56..79 | CDD:275380 | 3/22 (14%) | ||
LRR_4 | 79..118 | CDD:289563 | 13/38 (34%) | ||
leucine-rich repeat | 80..103 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 104..151 | CDD:275380 | 20/70 (29%) | ||
leucine-rich repeat | 152..172 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 173..195 | CDD:275380 | 6/21 (29%) | ||
leucine-rich repeat | 196..219 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 220..242 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 243..266 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 267..290 | CDD:275380 | 12/71 (17%) | ||
LRRCT | 299..351 | CDD:214507 | 15/51 (29%) | ||
EGF_CA | 417..449 | CDD:238011 | 6/41 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |