| Sequence 1: | NP_001261796.1 | Gene: | trn / 39491 | FlyBaseID: | FBgn0010452 | Length: | 751 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001107114.1 | Gene: | lrrc3 / 100001372 | ZFINID: | ZDB-GENE-080327-13 | Length: | 266 | Species: | Danio rerio |
| Alignment Length: | 314 | Identity: | 64/314 - (20%) |
|---|---|---|---|
| Similarity: | 111/314 - (35%) | Gaps: | 83/314 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 196 PVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNI----SHDSFLGLQELRIL 256
Fly 257 DLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFS 321
Fly 322 DNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSC 386
Fly 387 DCRVMWLHNLLVAKNASQDDVSELLCEF--PERLRGES-LRHLNPAMMGCTHADPRKQALIGALL 448
Fly 449 VGSAATITALALVLYRCRHKIRETIKGGLWGNSALGRKEREYQKTFCDEDYMSR 502 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trn | NP_001261796.1 | leucine-rich repeat | 62..80 | CDD:275380 | |
| LRR_8 | 83..142 | CDD:290566 | |||
| leucine-rich repeat | 84..107 | CDD:275380 | |||
| leucine-rich repeat | 108..131 | CDD:275380 | |||
| LRR_RI | 129..421 | CDD:238064 | 49/230 (21%) | ||
| LRR_8 | 132..190 | CDD:290566 | |||
| leucine-rich repeat | 132..155 | CDD:275380 | |||
| leucine-rich repeat | 156..179 | CDD:275380 | |||
| leucine-rich repeat | 180..204 | CDD:275380 | 3/7 (43%) | ||
| LRR_8 | 203..263 | CDD:290566 | 13/63 (21%) | ||
| leucine-rich repeat | 205..228 | CDD:275380 | 3/22 (14%) | ||
| leucine-rich repeat | 229..252 | CDD:275380 | 6/26 (23%) | ||
| LRR_8 | 252..308 | CDD:290566 | 16/55 (29%) | ||
| leucine-rich repeat | 253..276 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 277..300 | CDD:275380 | 9/22 (41%) | ||
| leucine-rich repeat | 301..322 | CDD:275380 | 0/20 (0%) | ||
| LRR_8 | 325..384 | CDD:290566 | 12/58 (21%) | ||
| leucine-rich repeat | 326..350 | CDD:275380 | 7/23 (30%) | ||
| leucine-rich repeat | 351..373 | CDD:275380 | 2/21 (10%) | ||
| lrrc3 | NP_001107114.1 | LRR_RI | <14..161 | CDD:238064 | 44/202 (22%) |
| LRRNT | 38..72 | CDD:214470 | 5/33 (15%) | ||
| leucine-rich repeat | 51..74 | CDD:275378 | 6/29 (21%) | ||
| LRR 1 | 71..92 | 7/27 (26%) | |||
| LRR_8 | 74..131 | CDD:290566 | 21/80 (26%) | ||
| LRR_4 | 74..111 | CDD:289563 | 12/36 (33%) | ||
| leucine-rich repeat | 75..95 | CDD:275378 | 7/19 (37%) | ||
| LRR 2 | 95..116 | 8/20 (40%) | |||
| leucine-rich repeat | 96..120 | CDD:275378 | 9/47 (19%) | ||
| LRR 3 | 120..141 | 7/29 (24%) | |||
| leucine-rich repeat | 121..144 | CDD:275378 | 8/31 (26%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR24373 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||