DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17300 and Atp5pb

DIOPT Version :10

Sequence 1:NP_648631.1 Gene:CG17300 / 39489 FlyBaseID:FBgn0036345 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_033855.2 Gene:Atp5pb / 11950 MGIID:1100495 Length:256 Species:Mus musculus


Alignment Length:141 Identity:36/141 - (25%)
Similarity:55/141 - (39%) Gaps:41/141 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ALRPLTVATSRSATTHSAQ----GLSRLPGHGSPGKVRPGFPSDNW---------VKGPMGVGLL 57
            ||.|..:..:|:  .|:.|    .|..||.:|  ||||.|...:.:         |.||..:|  
Mouse    22 ALGPGVLQATRA--FHTGQPRLAPLPPLPEYG--GKVRLGLIPEEFFQFLYPKTGVTGPYVLG-- 80

  Fly    58 AYICSGDCCAIKHEHSGLSLGIMEDGYYSSGITIGILTTFAVIRLLPAIVKWADSEIIKIESEY- 121
                           :||||..:....|.  ||....:|.:|:.|:..::|...:..    .|: 
Mouse    81 ---------------TGLSLYFLSKEIYV--ITPETFSTISVVGLIVYVIKKYGASF----GEFI 124

  Fly   122 EKSRETKIKVL 132
            :|..|.||..|
Mouse   125 DKLNEEKIAQL 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17300NP_648631.1 ATP-synt_Fo_b 79..>133 CDD:473877 13/55 (24%)
Atp5pbNP_033855.2 Mt_ATP-synt_B 83..244 CDD:368426 16/59 (27%)

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