DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx13 and PEP12

DIOPT Version :9

Sequence 1:NP_001261794.1 Gene:Syx13 / 39485 FlyBaseID:FBgn0036341 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_014679.1 Gene:PEP12 / 854201 SGDID:S000005562 Length:288 Species:Saccharomyces cerevisiae


Alignment Length:279 Identity:61/279 - (21%)
Similarity:134/279 - (48%) Gaps:34/279 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 AAGGSSGFSPT-EFMSLSEDIGHNITAIHSSTKQLEKQLKLIGTSKEQPNLREK-VHTINTKCNA 97
            |....|.||.: ||.:|.|::...:..|:.....|::....:.:..::.::..| |..||.:..|
Yeast    13 AVWNGSRFSDSPEFQTLKEEVAAELFEINGQISTLQQFTATLKSFIDRGDVSAKVVERINKRSVA 77

  Fly    98 RVQ-------TTSQDLQRLQAVVRHG-DRQQKLQLEKLTREFHGVVEKYSNLQRRISSAMRQTLQ 154
            :::       ..:..::::.|:.... |:.|.:..|||.|:.....:::..:||:.:..|:|..:
Yeast    78 KIEEIGGLIKKVNTSVKKMDAIEEASLDKTQIIAREKLVRDVSYSFQEFQGIQRQFTQVMKQVNE 142

  Fly   155 QAQQFADQVVETNARAELLQQQR---------------LEQAHLQQE-----HDMLDDRRRQVEQ 199
            :|::..:.....|..|.|.::||               :|:..:..|     .::::.|.:::..
Yeast   143 RAKESLEASEMANDAALLDEEQRQNSSKSTRIPGSQIVIERDPINNEEFAYQQNLIEQRDQEISN 207

  Fly   200 IESDIIDVNQIMTQLSGLVHDQGQQMDFIENSIEQTAANVEDGTSELAKAAR-SRQSYRRKILIL 263
            ||..|.::|::...|..:|..||..:|.||.:|..|:.|.:..:.||.||.| .:::.|.::.:|
Yeast   208 IERGITELNEVFKDLGSVVQQQGVLVDNIEANIYTTSDNTQLASDELRKAMRYQKRTSRWRVYLL 272

  Fly   264 LVIAVIIGLIVTGVIVAKL 282
            :|:.|::..|   .::.||
Yeast   273 IVLLVMLLFI---FLIMKL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx13NP_001261794.1 Syntaxin_2 54..153 CDD:291208 18/107 (17%)
SNARE_syntaxin7_like 190..249 CDD:277200 17/58 (29%)
PEP12NP_014679.1 COG5325 4..288 CDD:227635 59/277 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 82 1.000 Inparanoid score I1604
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53539
OrthoFinder 1 1.000 - - FOG0000747
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.930

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