DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx13 and Syx17

DIOPT Version :10

Sequence 1:NP_524054.1 Gene:Syx13 / 39485 FlyBaseID:FBgn0036341 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001261414.1 Gene:Syx17 / 38541 FlyBaseID:FBgn0035540 Length:346 Species:Drosophila melanogaster


Alignment Length:243 Identity:56/243 - (23%)
Similarity:109/243 - (44%) Gaps:43/243 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 IGHNITAIHSSTKQLEKQLKLIG----TSKEQPNLREKVHTINTKCNARVQTTSQDLQRLQAVVR 114
            :.|:::.:.:....:||.|.| |    ..||:.|....:        .:::....::..|:..||
  Fly    24 VPHHLSLLKNHRSNIEKSLAL-GDWQKIKKEELNAMRVI--------KQIKNLLLEMDALREKVR 79

  Fly   115 HGDRQQKLQLEKLTRE--FHGVVEKYSNLQRRISSAMRQTLQQAQQFAD------QVVETN---A 168
            ..|.::...|.|..|:  |.|:.| ::.||.:..::   ||  :.|:.|      |.|:.|   |
  Fly    80 EEDLERFDDLMKPGRDTAFAGMKE-FAELQLKSPTS---TL--SSQYDDDLDNQPQEVDMNSLPA 138

  Fly   169 RAELLQQQ---RLEQAHLQQEHDMLDDRRRQVEQIESDIIDVNQIMTQLSGLVHDQGQQMDFIEN 230
            ...:.|.|   :||:..|.|....||    |:|.::.:|.|::.:...:..|..:|...::.|.:
  Fly   139 HRHMPQLQLNFQLEEHQLAQRQACLD----QMENLQQEIYDLHGMFQGMRQLTAEQSVAVEKIAD 199

  Fly   231 SIEQTAANVEDGTSELAKAARSRQSYRRKILILLVIAVIIGLIVTGVI 278
            :.|:...||:.|...|.:|.    :|::  .:..|:..::|..|.|.|
  Fly   200 NAEEALENVQQGELNLRRAL----TYKK--AMYPVVGALLGTCVGGPI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx13NP_524054.1 Syntaxin_2 54..153 CDD:464199 21/104 (20%)
SNARE_syntaxin7_like 190..249 CDD:277200 14/58 (24%)
Syx17NP_001261414.1 SNARE_syntaxin17 156..217 CDD:277199 16/64 (25%)

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