DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx13 and Syx17

DIOPT Version :9

Sequence 1:NP_001261794.1 Gene:Syx13 / 39485 FlyBaseID:FBgn0036341 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001261414.1 Gene:Syx17 / 38541 FlyBaseID:FBgn0035540 Length:346 Species:Drosophila melanogaster


Alignment Length:243 Identity:56/243 - (23%)
Similarity:109/243 - (44%) Gaps:43/243 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 IGHNITAIHSSTKQLEKQLKLIG----TSKEQPNLREKVHTINTKCNARVQTTSQDLQRLQAVVR 114
            :.|:::.:.:....:||.|.| |    ..||:.|....:        .:::....::..|:..||
  Fly    24 VPHHLSLLKNHRSNIEKSLAL-GDWQKIKKEELNAMRVI--------KQIKNLLLEMDALREKVR 79

  Fly   115 HGDRQQKLQLEKLTRE--FHGVVEKYSNLQRRISSAMRQTLQQAQQFAD------QVVETN---A 168
            ..|.::...|.|..|:  |.|:.| ::.||.:..::   ||  :.|:.|      |.|:.|   |
  Fly    80 EEDLERFDDLMKPGRDTAFAGMKE-FAELQLKSPTS---TL--SSQYDDDLDNQPQEVDMNSLPA 138

  Fly   169 RAELLQQQ---RLEQAHLQQEHDMLDDRRRQVEQIESDIIDVNQIMTQLSGLVHDQGQQMDFIEN 230
            ...:.|.|   :||:..|.|....||    |:|.::.:|.|::.:...:..|..:|...::.|.:
  Fly   139 HRHMPQLQLNFQLEEHQLAQRQACLD----QMENLQQEIYDLHGMFQGMRQLTAEQSVAVEKIAD 199

  Fly   231 SIEQTAANVEDGTSELAKAARSRQSYRRKILILLVIAVIIGLIVTGVI 278
            :.|:...||:.|...|.:|.    :|::  .:..|:..::|..|.|.|
  Fly   200 NAEEALENVQQGELNLRRAL----TYKK--AMYPVVGALLGTCVGGPI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx13NP_001261794.1 Syntaxin_2 54..153 CDD:291208 21/104 (20%)
SNARE_syntaxin7_like 190..249 CDD:277200 14/58 (24%)
Syx17NP_001261414.1 SNARE_syntaxin17 156..217 CDD:277199 16/64 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467322
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5325
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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