DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx13 and Syx5

DIOPT Version :9

Sequence 1:NP_001261794.1 Gene:Syx13 / 39485 FlyBaseID:FBgn0036341 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_523582.4 Gene:Syx5 / 34966 FlyBaseID:FBgn0011708 Length:467 Species:Drosophila melanogaster


Alignment Length:267 Identity:56/267 - (20%)
Similarity:114/267 - (42%) Gaps:45/267 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SPTEFMSLSEDIGHNITAIHSSTKQLEKQLKLIGTSKEQP-NLREKVHTINTKCN------ARVQ 100
            |.:|||.::..||.||.:.::..::|....|......::| .::|..:.|....|      ||:|
  Fly   196 SYSEFMMVARFIGKNIASTYAKLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQ 260

  Fly   101 TTSQDLQRL---QAVVRHGDR-----QQKLQLEKLTREFHGVVE-KYSNLQRRISSAMRQTLQQ- 155
            ..|:|.:|.   :.:|.|...     |.|  |..::.:|..::| :..||:::  ...|....| 
  Fly   261 DISKDQRRHTNGKHLVSHSSNMVLALQSK--LASMSTDFKQILEVRTENLKQQ--KTRRDQFSQG 321

  Fly   156 -------------AQQFADQVVETNARAEL---------LQQQRLEQAHLQQEHDMLDDRRRQVE 198
                         |:|.:..:.|.|....:         |...:.:.|......:.:..|...::
  Fly   322 PGPLAAHTVSPSTAKQGSLLLSEENQAVSIDMGSSDTTPLLSTQTQMAIYDDSDNYVQQRAETMQ 386

  Fly   199 QIESDIIDVNQIMTQLSGLVHDQGQQMDFIENSIEQTAANVEDGTSELAKAARSRQSYRRKILIL 263
            .|||.|:::..|..||:.:|.:|.:.::.|:.::.....|:|....|:.|..:|..  :.:.|::
  Fly   387 NIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAHGEILKYFQSVS--KNRWLMI 449

  Fly   264 LVIAVII 270
            .:..|:|
  Fly   450 KIFGVLI 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx13NP_001261794.1 Syntaxin_2 54..153 CDD:291208 26/114 (23%)
SNARE_syntaxin7_like 190..249 CDD:277200 14/58 (24%)
Syx5NP_523582.4 SNARE_syntaxin5 379..451 CDD:277197 17/73 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455731
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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