DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx13 and Syx5

DIOPT Version :10

Sequence 1:NP_524054.1 Gene:Syx13 / 39485 FlyBaseID:FBgn0036341 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_523582.4 Gene:Syx5 / 34966 FlyBaseID:FBgn0011708 Length:467 Species:Drosophila melanogaster


Alignment Length:267 Identity:56/267 - (20%)
Similarity:114/267 - (42%) Gaps:45/267 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SPTEFMSLSEDIGHNITAIHSSTKQLEKQLKLIGTSKEQP-NLREKVHTINTKCN------ARVQ 100
            |.:|||.::..||.||.:.::..::|....|......::| .::|..:.|....|      ||:|
  Fly   196 SYSEFMMVARFIGKNIASTYAKLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQ 260

  Fly   101 TTSQDLQRL---QAVVRHGDR-----QQKLQLEKLTREFHGVVE-KYSNLQRRISSAMRQTLQQ- 155
            ..|:|.:|.   :.:|.|...     |.|  |..::.:|..::| :..||:::  ...|....| 
  Fly   261 DISKDQRRHTNGKHLVSHSSNMVLALQSK--LASMSTDFKQILEVRTENLKQQ--KTRRDQFSQG 321

  Fly   156 -------------AQQFADQVVETNARAEL---------LQQQRLEQAHLQQEHDMLDDRRRQVE 198
                         |:|.:..:.|.|....:         |...:.:.|......:.:..|...::
  Fly   322 PGPLAAHTVSPSTAKQGSLLLSEENQAVSIDMGSSDTTPLLSTQTQMAIYDDSDNYVQQRAETMQ 386

  Fly   199 QIESDIIDVNQIMTQLSGLVHDQGQQMDFIENSIEQTAANVEDGTSELAKAARSRQSYRRKILIL 263
            .|||.|:::..|..||:.:|.:|.:.::.|:.::.....|:|....|:.|..:|..  :.:.|::
  Fly   387 NIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAHGEILKYFQSVS--KNRWLMI 449

  Fly   264 LVIAVII 270
            .:..|:|
  Fly   450 KIFGVLI 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx13NP_524054.1 Syntaxin_2 54..153 CDD:464199 26/114 (23%)
SNARE_syntaxin7_like 190..249 CDD:277200 14/58 (24%)
Syx5NP_523582.4 COG5325 207..449 CDD:227635 50/247 (20%)
SNARE_syntaxin5 379..451 CDD:277197 17/73 (23%)

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