DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx13 and stx7

DIOPT Version :9

Sequence 1:NP_001261794.1 Gene:Syx13 / 39485 FlyBaseID:FBgn0036341 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_002936355.1 Gene:stx7 / 100379927 XenbaseID:XB-GENE-1004004 Length:259 Species:Xenopus tropicalis


Alignment Length:260 Identity:69/260 - (26%)
Similarity:132/260 - (50%) Gaps:26/260 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SSGFSPTEFMSLSEDIGHNITAIHSSTKQLEKQLKLIGTSKEQPNLREKVHTINTKCNARVQTTS 103
            |:|..|.:   |::.|..||..|..|:.::::.:..:||.::...||.::.......:...:.|.
 Frog     4 STGQDPAQ---LAQTISGNIQKITQSSSEIQRIVNQLGTVQDTAELRNRLQEKIQYAHKIAKDTD 65

  Fly   104 QDLQRLQAVVRHGD-RQQKLQLEKLTREFHGVVEKYSNLQRRISSAMRQTLQQAQQ-------FA 160
            :.|:...::....| ||:|||.::|..||..|:..:..:||:.:...::.:.:.:.       |.
 Frog    66 RCLKDYASLPLESDQRQRKLQKDRLVSEFSSVLNNFQKIQRQAAEKEKEFVARVRAGSRVSGGFP 130

  Fly   161 DQVVETNARAELL--QQQRLEQAHLQQEH------DMLDDRRRQVEQIESDIIDVNQIMTQLSGL 217
            |   ::.....||  :.:...||.:|:|.      .::::|...:.|:|.||..:|.|...|..:
 Frog   131 D---DSQKEGSLLTWENEGQPQATMQEEEITEDDLHLIEERETAIRQLEEDIQGINDIFKDLGMM 192

  Fly   218 VHDQGQQMDFIENSIEQTAANVEDGTSELAKAARSRQSYRRKILI----LLVIAVIIGLIVTGVI 278
            ||:||:.:|.||.::|....:|:....:||:||..::..||||.|    |:|.|.:||||:.|.:
 Frog   193 VHEQGEMIDSIEANVENADVHVQQANQQLARAAEYQRKSRRKICIIIAVLVVAATVIGLIIWGAV 257

  Fly   279  278
             Frog   258  257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx13NP_001261794.1 Syntaxin_2 54..153 CDD:291208 23/99 (23%)
SNARE_syntaxin7_like 190..249 CDD:277200 19/58 (33%)
stx7XP_002936355.1 Syntaxin_2 16..116 CDD:373109 23/99 (23%)
SNARE_syntaxin7 165..224 CDD:277228 19/58 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53539
OrthoDB 1 1.010 - - D1204812at2759
OrthoFinder 1 1.000 - - FOG0000747
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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