Protein Alignment Srrm1 and Srrm1

DIOPT Version :10

• Sequence 1: NP_648627.1
• Gene: Srrm1 / 39483
• FlyBaseID: FBgn0036340
• Length: 954
• Species: Drosophila melanogaster
• Sequence 2: NP_001423761.1
• Gene: Srrm1 / 313620
• RGDID: 1311258
• Length: 922
• Species: Rattus norvegicus
• Alignment Length: 1072
• Identity: 330/1072 - (30%)
• Similarity: 466/1072 - (43%)
• Gaps: 284/1072 - (26%)

  Fly     3 FTGTNQQQDTRFSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIEDDVVVEF 67
            |.||:.:||.|||:|:|||:||:||.:||.|:||||||.|:|::|||:|::|:||..|||||:||
  Rat     6 FRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEF 70

  Fly    68 VYNQLEEEKYPCPKKMQINMTGFLNGRNARQFMGELWALLLSAQESDSGIPAEFIQQKKDEILKR 132
            ::||| |.|.|..|.||||:||||||:|||:||||||.|||||||:.:|||:.|::.||:||.:|
  Rat    71 IFNQL-EVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQR 134

  Fly   133 EEEQ------RQRDRSRSRSRSRSQRDSSRRDRQRDRSKSKSRSRSRSMKPANNNGSVPSAAREA 191
            :.||      :::|..:.: |.:.:::|||  .:|:||:|..|.:|||..|
  Rat   135 QIEQEKLASLKKQDEDKDK-RDKEEKESSR--EKRERSRSPRRRKSRSPSP-------------- 182

  Fly   192 AANAAAKIRKRGSSSAARPGSRERRSSRRPRSRSRSRSRTAG--KKTGSVE-PAPA-----KTVN 248
                     :|.||...|  .|:|..||.||.|::|||.:..  ||..|.| |.|:     .:|.
  Rat   183 ---------RRRSSPVRR--ERKRSHSRSPRHRTKSRSPSPAPEKKEKSPELPEPSVRMKDSSVQ 236

  Fly   249 GRHSTD------KSSPVP----PA-SKNKSRSRSHSRSRSPRSRSRSPSAKRSRSRSSSR-RSRR 301
            ...||.      |..|||    |: .||..:.:..:|   |||||||.|..|:||||.|. |.||
  Rat   237 EATSTSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTR---PRSRSRSKSRSRTRSRSPSHTRPRR 298

  Fly   302 RGRSSSISLSPERNQDQF------------------EHRRNKNSVQNKRQYRNNRGDSASSMERG 348
            |.||.|.|.||.|.....                  .|||:::  ..:|:.|::...|.||....
  Rat   299 RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRS--PGRRRRRSSASLSGSSSSSS 361

  Fly   349 NDRGRQFGGGGGGR-----RGGRRFSPRGRSPMRQDNGGGNGGNRFQRSNSRRRSRSRRLSRSP- 407
            :.|.|........|     |..||.||....|                   |||.|....:..|
  Rat   362 SSRSRSPPKKPPKRTSSPPRKTRRLSPSASPP-------------------RRRHRPSSPATPPP 407

  Fly   408 -MRYSRSPRRFNNRRRSPMMNFRGGGRGGGRGGGHRQMWQHRGGSPNFRGGGRIHWQARHSPGGG 471
             .|:|.:|::.|..|:|.:      ....||..|  ::.:|:|            .:.|.||...
  Rat   408 KTRHSPTPQQSNRARKSRV------SVSPGRTSG--KVTKHKG------------TEKRESPSPA 452

  Fly   472 GR-----------GGGGGMGRFD----RRQSPQQN----------------RYNRDH-------- 497
            .:           ..|..|...|    |||..:||                |..|.|
  Rat   453 PKPRKVELSESEEDKGSKMAAADSVQQRRQYRRQNQQSSSDSGSSSTSEDERPKRSHVKNGEVGR 517

  Fly   498 --RQSPMQQNQPF----RKQFSPHQGPGRRFSSPQQRRNSRDRRPNSRERRSSPGGGGGHMNRWD 556
              |.||.:...|.    :|:.||....|:|:.||..:        :||.|||            .
  Rat   518 RRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTK--------SSRRRRS------------P 562

  Fly   557 NPPPARNRRSSSGS---SAGGRQQRQRSASPPEKRRSSHSRSRSLSRNRSRSRSSSQHSRKRESP 618
            :|||||.|||.|.:   ......:|:||.:||.:||:.....|                  |.||
  Rat   563 SPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPR------------------RRSP 609

  Fly   619 IGRSSVEYAGPAVNTIDLCREEQQRKNKPETIIVLDEGPAVRSSYAS----LSRTPSPFLKPHER 679
            ..|   .|:.|.           ||:..|        .|..:...||    ..|..||...|..|
  Rat   610 SPR---RYSPPI-----------QRRYSP--------SPPPKRRTASPPPPPKRRASPSPPPKRR 652

  Fly   680 LAAAKAAAAASAAVPKK------SRDQSQSSSSDSSAESDDSEEQPRRKKQPTNMETSKGKKEKV 738
            ::.:......|..|.|:      |:.:..||...|:.|:...:...|....|............|
  Rat   653 VSHSPPPKQRSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPV 717

  Fly   739 RRSSESSTSSEQSDDEDNSSGDERLKKKLQQRKSKEAAALKGKEKEHEKEKDKRRSDKKSKRGAI 803
            ||.:.:|....|| ...::....|:.:..:.:|.|:||:       ...:..:|.|..:|
  Rat   718 RRGASASPQGRQS-PSPSTRPIRRVSRTPEPKKIKKAAS-------PSPQSVRRVSSSRS----- 769

  Fly   804 SSGDEESTSSRKRGHKKTRRDEAGDNSDSEDEHVPKKKRKKAKKPADS----SDSDSEASSKRKK 864
            .||..|.|:.:........:.::...:.|     |....||||.|..|    .:||.|...|:||
  Rat   770 VSGSPEPTAKKPPAPPSPVQSQSPSTNWS-----PAAPAKKAKSPTPSPSPARNSDQEGGGKKKK 829

  Fly   865 HKKHKKH--SKKSKKHKKHKR-KCSAGKSRADSSSQGSSDEDEQLPHSVAAKRNGNAGKLALLLP 926
            .||.|||  .||.|||||||: |..|..:.|.::           |.:|:|....:|.:.....|
  Rat   830 KKKDKKHKKDKKHKKHKKHKKEKAVAVATPAPAA-----------PAAVSAAATPSAQEEPAAAP 883

  Fly   927 -----GASGAGVIN-EDLEKQLRERALKSMKK 952
                 ..|.|...| :|||:.|||:||:||:|
  Rat   884 EPRKETESEAEDDNLDDLERHLREKALRSMRK 915

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srrm1	NP_648627.1	PWI	43..115	CDD:460224	48/71 (68%)
Srrm1	NP_001423761.1	PWI	46..115	CDD:460224	46/68 (68%)
		PHA03247	<389..817	CDD:223021	108/487 (22%)