Protein Alignment Srrm1 and rsr-1

DIOPT Version :10

• Sequence 1: NP_648627.1
• Gene: Srrm1 / 39483
• FlyBaseID: FBgn0036340
• Length: 954
• Species: Drosophila melanogaster
• Sequence 2: NP_001370022.1
• Gene: rsr-1 / 173013
• WormBaseID: WBGene00004706
• Length: 601
• Species: Caenorhabditis elegans
• Alignment Length: 917
• Identity: 237/917 - (25%)
• Similarity: 347/917 - (37%)
• Gaps: 337/917 - (36%)

  Fly     3 FTGTNQQQDTRFSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIEDDVVVEF 67
            |.|.|.:||.|||||||||:|.|||...|.:::|:::..:||::|||:.::.|||.:|||||||:
 Worm     6 FRGANSEQDGRFSDKEKKLLKTMKFEPQLEQKIDLNRCNMDVIKPWITARVNDILGMEDDVVVEY 70

  Fly    68 VYNQLEEEKYPCPKKMQINMTGFLNGRNARQFMGELWALLLSAQESDSGIPAEFIQQKKDEILKR 132
            :.:|::::... ||.:|||:|||||.|.||:|:|:||.||:.|..|:.||||..:.||..|:...
 Worm    71 ILSQIDDKNLN-PKLLQINVTGFLNARRAREFVGDLWNLLIEANASEDGIPASLVNQKMAEMKTN 134

  Fly   133 EEEQRQRDRSRSRSRSRSQRDSSRRDRQRDRSKSKSRSRSRSMKPANNNGSVPSAAREAAANAAA 197
            :.:::..||          .|:...:|.:..|                ||.....|||.|.
 Worm   135 DRDEKGDDR----------EDNDWTNRYKTLS----------------NGRYTGPAREKAV---- 169

  Fly   198 KIRKRGSSSAARPGSRERRSSRRPRSRSRSRSRTAGKKTGSVEPAPAKTVNGRHSTDKSSPVPPA 262
                              |..|.|
 Worm   170 ------------------RDDRIP----------------------------------------- 175

  Fly   263 SKNKSRSRSHSRSRSPRSRSRSPSAKRSRSRSSSRRSRRRGRSSSISLSPERNQDQFEHRRNKNS 327
                  :|:.|..::|..|:.||.
 Worm   176 ------ARALSPRKTPPRRNASPG----------------------------------------- 193

  Fly   328 VQNKRQYRNNRGDSASSMERGNDRGRQFGGGGGGRRGGRRFSPRGRSPMRQDNGGGNGGNRFQRS 392
                                        |.||||....||              ||:.||
 Worm   194 ----------------------------GDGGGGSPAARR--------------GGSAGN----- 211

  Fly   393 NSRRRSRSRRLSRSPMRYSRSPRRFNNRRRSPMMNFRGGGRGGGRGGGHRQMWQHRGGSPNFRGG 457
              ||||..||  .||.|  .||||  :.||||                     ..|.|||..|||
 Worm   212 --RRRSPPRR--GSPRR--GSPRR--DTRRSP---------------------PRRRGSPPARGG 247

  Fly   458 GRIHWQARHSPGGGGRGGGGGMGRFDRRQSPQQNRYNRDHRQSPMQQNQPFRKQFSPHQGPGRRF 522
                                  .|.|||:..:..|..::..:...::....:|:....:...:..
 Worm   248 ----------------------DRRDRREDRRPVRDEKEREEESRRREIERKKRHEEAELRQKAI 290

  Fly   523 SSPQQRRNSRDRRPNSRERRSSPGGGGGHMNRWDNPPPARNRRSSSGS-SAGGRQQRQRSASPP- 585
            :|...|..|     .|..||.||...       .:|||||.|||.|.| |...::.:.||.|||
 Worm   291 ASVAARAKS-----GSPRRRRSPSAS-------KSPPPARRRRSPSQSKSPAPKRAKSRSKSPPA 343

  Fly   586 --EKRRS-SHSRSRSLSRNRSRSRSSSQHSRKRESPIGRSSVEYAGPAVNTIDLCREEQQRKNKP 647
              .:||| |.|:|...:..|::|||.|..:|:|.||    |...:.||          .:|:..|
 Worm   344 PARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSP----SASKSPPA----------PRRRRSP 394

  Fly   648 ETIIVLDEGPAVRSSYASLSRTPSP--FLKPHERLAAAKAAAAASAAVPKKSRDQSQSSSSDSSA 710
                             |.||:|:|  .:.|..|..:..|:.:..|....|||.:|..:.....:
 Worm   395 -----------------SKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRS 442

  Fly   711 ESDDSEEQPRRKKQPTNMETSKGKKEKVRRSSESSTSSEQSDDEDNSSGDERLKKKLQQRKSKEA 775
            .|......|||::.|     ||..:...||.|.|.:.|                :..::|:|..|
 Worm   443 PSQSKSPAPRRRRSP-----SKSPQAPRRRRSPSGSKS----------------RSPRRRRSPAA 486

  Fly   776 AALKGKEKEHEKEKDKRRSDKKSKRGAISSGDEESTSSRKRG----HKKTRRDEAGDNSDSEDEH 836
            |..:.:..:..:...:|||              .|:|||.|.    .::.|:|     |:.:...
 Worm   487 APRRRQSPQRRRSPRRRRS--------------PSSSSRSRSPPPPPRRPRQD-----SEQQAPV 532

  Fly   837 VPKKKRKKAKKPAD-----SSDSDSEASSKRKKHKKHKKHSKKSKKHKKHKRKCSAGKSRADSSS 896
            ..|....|.::|.|     |.||::|...:|||.||.||.:||.||.||.|:.   .|.|:.|:|
 Worm   533 AVKSPEMKKRRPNDTDSDVSVDSEAEEERRRKKAKKEKKAAKKHKKEKKSKKH---RKRRSPSAS 594

  Fly   897 QGSSDED 903
            :..|:.|
 Worm   595 ESGSESD 601

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srrm1	NP_648627.1	PWI	43..115	CDD:460224	37/71 (52%)
rsr-1	NP_001370022.1	PWI	46..117	CDD:460224	37/71 (52%)