DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS12 and RSRC1

DIOPT Version :9

Sequence 1:NP_729866.1 Gene:RpS12 / 39480 FlyBaseID:FBgn0286213 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_001258767.1 Gene:RSRC1 / 51319 HGNCID:24152 Length:334 Species:Homo sapiens


Alignment Length:74 Identity:19/74 - (25%)
Similarity:29/74 - (39%) Gaps:11/74 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEH 79
            |..|......||.||:.:..||       :|.||.::.:..    |:...|.:...||..:....
Human   177 LPPAEQAKARLQLVLEAAAKAD-------EALKAKERNEEE----AKRRKEEDQATLVEQVKRVK 230

  Fly    80 QIPLIRVDS 88
            :|..|..||
Human   231 EIEAIESDS 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS12NP_729866.1 Ribosomal_L7Ae 23..118 CDD:396000 17/66 (26%)
RSRC1NP_001258767.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..179 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..220 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..290
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.