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Protein Alignment RpS12 and Gadd45
DIOPT Version :9
Sequence 1: | NP_729866.1 |
Gene: | RpS12 / 39480 |
FlyBaseID: | FBgn0286213 |
Length: | 139 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_610264.1 |
Gene: | Gadd45 / 35646 |
FlyBaseID: | FBgn0033153 |
Length: | 163 |
Species: | Drosophila melanogaster |
Alignment Length: | 114 |
Identity: | 27/114 - (23%) |
Similarity: | 52/114 - (45%) |
Gaps: | 18/114 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 DVDVDVPSA---APVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFD 64
|:::::..| ||: ...|.:||.....::.:..||...|:...|: ...::.|::|:..|
Fly 17 DLELEIDMAMECAPI---GRTIKSALLRAQSEARVIVGLSAAINVLSKS--PEGSLFCLMAQPKD 76
Fly 65 EPN----YKKLVTALCNEHQIPLIRVDSHKKLGEWSG------LCKIDK 103
..: ::.|:.|.|.|:.|.:|:||...||....| .|.:.|
Fly 77 GDSATHMHEVLLEAFCYENDIYVIKVDDATKLSRILGQDSVESCCLVQK 125
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RpS12 | NP_729866.1 |
Ribosomal_L7Ae |
23..118 |
CDD:396000 |
22/91 (24%) |
Gadd45 | NP_610264.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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