DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS12 and RpL7A

DIOPT Version :10

Sequence 1:NP_729866.1 Gene:RpS12 / 39480 FlyBaseID:FBgn0286213 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_511063.1 Gene:RpL7A / 31588 FlyBaseID:FBgn0014026 Length:271 Species:Drosophila melanogaster


Alignment Length:103 Identity:23/103 - (22%)
Similarity:41/103 - (39%) Gaps:19/103 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEG 105
            |.:...|.:::::|.|.::|...|.......:.|||.:..:|...|....:||.   |.:     
  Fly   144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGR---LVR----- 200

  Fly   106 KPRKVCGCSVVVIKD------FGEETPALDVVKDHLRQ 137
              ||.|....:...|      ||:   .|:.||.:..:
  Fly   201 --RKTCTTLALTTVDNNDKANFGK---VLEAVKTNFNE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS12NP_729866.1 Ribosomal_L7Ae 23..118 CDD:426153 17/76 (22%)
RpL7ANP_511063.1 SNU13 18..271 CDD:455736 23/103 (22%)

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