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Protein Alignment RpS12 and Rpl7a
DIOPT Version :9
Sequence 1: | NP_729866.1 |
Gene: | RpS12 / 39480 |
FlyBaseID: | FBgn0286213 |
Length: | 139 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001107863.1 |
Gene: | Rpl7a / 296596 |
RGDID: | 1307586 |
Length: | 266 |
Species: | Rattus norvegicus |
Alignment Length: | 161 |
Identity: | 32/161 - (19%) |
Similarity: | 55/161 - (34%) |
Gaps: | 41/161 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 VPSAAPVLDGAMDINTALQ-------------EVLKKSLIADG-----------------LVHGI 42
||.|......|:|..||.| :..|:.|:|.. |..|:
Rat 76 VPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGV 140
Fly 43 HQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKP 107
:.....::.::|.|.::|...|.......:.|||.:..:|...:....:||.. ..
Rat 141 NTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRL----------VH 195
Fly 108 RKVCGCSVVVIKDFGEETPALDVVKDHLRQN 138
||.| .:|...:...|:..||..:.:.:|.|
Rat 196 RKTC-TTVAFTQVNSEDKGALAKLVEAIRTN 225
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1358 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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