Protein Alignment RpS12 and Snu13

DIOPT Version :9

• Sequence 1: NP_729866.1
• Gene: RpS12 / 39480
• FlyBaseID: FBgn0286213
• Length: 139
• Species: Drosophila melanogaster
• Sequence 2: NP_035612.2
• Gene: Snu13 / 20826
• MGIID: 893586
• Length: 128
• Species: Mus musculus
• Alignment Length: 117
• Identity: 28/117 - (23%)
• Similarity: 52/117 - (44%)
• Gaps: 11/117 - (9%)

  Fly     1 MADVDVDVPSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDE 65
            |.:.||: |.|.|:.|.  .:...|.:::::|.....|..|.::|.|.|::..:...::|...:.
Mouse     1 MTEADVN-PKAYPLADA--HLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEP 62

  Fly    66 PNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVV 117
            ......:..||.:..:|.:.|.|.:.||...|:        .|.|..|||.:
Mouse    63 LEIILHLPLLCEDKNVPYVFVRSKQALGRACGV--------SRPVIACSVTI 106

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpS12	NP_729866.1	Ribosomal_L7Ae	23..118	CDD:396000	21/95 (22%)
Snu13	NP_035612.2	SNU13	7..128	CDD:411046	25/111 (23%)
		Interaction with U4 snRNA and U4atac snRNA. /evidence=ECO:0000250|UniProtKB:P55769	36..48		4/11 (36%)
		Important for U4 snRNA-binding. /evidence=ECO:0000250|UniProtKB:P55769	96..128		5/11 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1358
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810