DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS12 and Rps12

DIOPT Version :9

Sequence 1:NP_729866.1 Gene:RpS12 / 39480 FlyBaseID:FBgn0286213 Length:139 Species:Drosophila melanogaster
Sequence 2:XP_030100822.1 Gene:Rps12 / 20042 MGIID:98105 Length:205 Species:Mus musculus


Alignment Length:81 Identity:18/81 - (22%)
Similarity:26/81 - (32%) Gaps:25/81 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 HGIH----QACKALDKRQAVLCILAESFDEPNYKKLVTA---LCNEHQIPLIRVDSHKKLG--EW 95
            |..|    ::|....|....|          .|:...||   .|..      |:...:|||  :.
Mouse    27 HRSHLFSGRSCTCAQKSSGAL----------KYRHAATAGLFPCRR------RLARRRKLGCVQD 75

  Fly    96 SGLCKIDKEGKPRKVC 111
            |....|.:.|:.|..|
Mouse    76 SASPVIHRHGRGRHSC 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS12NP_729866.1 Ribosomal_L7Ae 23..118 CDD:396000 18/81 (22%)
Rps12XP_030100822.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849463
Domainoid 1 1.000 135 1.000 Domainoid score I4957
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 166 1.000 Inparanoid score I4171
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54130
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001708
OrthoInspector 1 1.000 - - oto94366
orthoMCL 1 0.900 - - OOG6_101261
Panther 1 1.100 - - LDO PTHR11843
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1230
SonicParanoid 1 1.000 - - X1102
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.930

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