DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL20 and Mrpl20

DIOPT Version :10

Sequence 1:NP_524051.1 Gene:mRpL20 / 39477 FlyBaseID:FBgn0036335 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001102898.1 Gene:Mrpl20 / 680747 RGDID:1588219 Length:149 Species:Rattus norvegicus


Alignment Length:123 Identity:48/123 - (39%)
Similarity:74/123 - (60%) Gaps:0/123 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVFLNLPLLVRSRGPDEFWRKRRIFKLAAHYRSRTRNVYSFAIRSVHRALAYATKGRKLKKLDMA 65
            ||||...|.:|:|..|.:||.:.:.|.|.|:|.|....|..|:|:|.||....|..|:|||.::.
  Rat     1 MVFLTTRLWLRNRLTDRYWRVQEVLKHAGHFRGRKNRCYRLAVRAVTRAFVKCTNSRRLKKRNLR 65

  Fly    66 QLWSTRVEAGCQQYGVGLETFKEGLARSDILLNKKVLSDLAIWEPRSFEALVKISRER 123
            .||..|:.|..|::|:....|...|.:..:.||:|||.||||:||::|::|..:::.|
  Rat    66 TLWINRITAASQEHGLQYPAFILNLVKCQVELNRKVLVDLAIYEPKTFKSLAALAKRR 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL20NP_524051.1 Ribosomal_L20 13..113 CDD:459817 39/99 (39%)
Mrpl20NP_001102898.1 Ribosomal_L20 13..118 CDD:197305 41/104 (39%)

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