DRSC/TRiP Functional Genomics Resources

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Protein Alignment MICAL-like and actn1

DIOPT Version :10

Sequence 1:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster
Sequence 2:XP_012824128.1 Gene:actn1 / 780123 XenbaseID:XB-GENE-493909 Length:912 Species:Xenopus tropicalis


Alignment Length:152 Identity:30/152 - (19%)
Similarity:56/152 - (36%) Gaps:51/152 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GRVLATSII---LNDDAVPTTQV----LITTSHHDNVAKRKESFISFFKLPIRMLMCDHEGIISP 96
            |:|:|...|   ..::.||:|.:    |:....|.|:...::           :||.|       
 Frog    27 GQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQD-----------VLMQD------- 73

  Fly    97 TLTCLTSHFFGIYDGHRRSRPVSGSVSSDDRMVLQAVSPETVGSTAVVALVCSSHII-----VSN 156
                  |..:.|::          .:|.|.:..|.::.|.....:::|    .|::.     :..
 Frog    74 ------SRLYLIFE----------FLSMDLKKYLDSIPPGQYMDSSLV----KSYLYQILQGIVF 118

  Fly   157 CGGSRVVLLRGKESMPLSVDQK 178
            | .||.||.|..:...|.:|.|
 Frog   119 C-HSRRVLHRDLKPQNLLIDDK 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 15/82 (18%)
LIM_like_1 146..207 CDD:188784 10/38 (26%)
PTZ00449 <411..727 CDD:185628
bMERB_dom 785..933 CDD:463467
actn1XP_012824128.1 CH_ACTN_rpt1 26..130 CDD:409063 27/141 (19%)
CH_ACTN_rpt2 134..248 CDD:409065 3/6 (50%)
Spectrin 272..382 CDD:395348
SPEC 393..620 CDD:238103
Spectrin 632..731 CDD:395348
PTZ00184 738..>869 CDD:185504
EFhand_Ca_insen 842..908 CDD:430177
Blue background indicates that the domain is not in the aligned region.

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