DRSC/TRiP Functional Genomics Resources

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Protein Alignment MICAL-like and actn1

DIOPT Version :10

Sequence 1:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster
Sequence 2:XP_068068966.1 Gene:actn1 / 560400 ZFINID:ZDB-GENE-081113-4 Length:924 Species:Danio rerio


Alignment Length:568 Identity:123/568 - (21%)
Similarity:184/568 - (32%) Gaps:216/568 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KALEYWCRVVTQGYNGVKVENMTTSWRNGLAFCAIIHHFRPDLIDFDRLKADDIYENNDLAFTTA 78
            :.|..||:..|..|..|.::|...||::||.|||:||..||:|||:::|:.||...|.:.||..|
Zfish   158 EGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYNKLRKDDPMTNLNTAFDVA 222

  Fly    79 EKYLGIPALLDAADMVSYEVPDRLSILTYLSQFYKVLG-------------KSLKHPKPEEPLGE 130
            ||||.||.:|||.|:|....||..:|:||:|.||....             |.|...:..|.|.|
Zfish   223 EKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLME 287

  Fly   131 --------------------ESEPPQKVMHIVGMPRRD---------------KCQ--------- 151
                                |:..|:..|..:.....|               |||         
Zfish   288 DYEKLASDLLEWIRRTIPWLENRVPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQ 352

  Fly   152 ----KCNLPVFL-AERVLVG---------------------------------------KRAYH- 171
                ..|.|.|: :|..:|.                                       |.|.| 
Zfish   353 TKLRLSNRPAFMPSEGKMVSDISNSWGRLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHE 417

  Fly   172 -----------------------RTCLK------------------CARCSSLLTPGSFYETEVN 195
                                   :..||                  .|..:..|....:|::...
Zfish   418 AWTDGKEEMLQHKDFETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELEYYDSPSV 482

  Fly   196 NIYCCETCPDEESEPESDILKLKTTTTDSPNDKQMVAQSSDYSE-----------AEDKQEDLED 249
            |..|...|...:|   ..:|..|.:......:|.:......|.|           .|...|||:|
Zfish   483 NARCQRICDQWDS---LGVLTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQD 544

  Fly   250 NDIRTTDKP--------ENFQ---PPSNKDEQ-----NNEL------------------TINP-- 278
            ..|..|.:.        |.|:   |.::|:.|     :||:                  ||||  
Zfish   545 TFIVHTIEEIQGLSTAHEQFKATLPEADKERQAILGIHNEIAKIVQTYHVNMAGQNPYTTINPQE 609

  Fly   279 VNPILSEERKISFIPLDEEDGGLIE-------------QYNKSTTPVKPAIPEK-PKVSTLPLDD 329
            :|....:.|::  :|  :.|..|||             |:......:.|.|..| .::..:.:  
Zfish   610 INAKWDKVRQL--VP--QRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRISI-- 668

  Fly   330 EQHAGVEQNNDLAVSPENDIPKEKLKISSVSIYLEDDRLVVDAIHPDN 377
            |.|..:|.........|..|...|.||..:.   .|.:|:.:|:..||
Zfish   669 EMHGTLEDQLTHLRQYEKSIVNYKPKIDQLE---GDHQLIQEALIFDN 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 47/100 (47%)
LIM_like_1 146..207 CDD:188784 20/170 (12%)
PTZ00449 <411..727 CDD:185628
bMERB_dom 785..933 CDD:463467
actn1XP_068068966.1 CH_ACTN_rpt1 38..142 CDD:409063
CH_ACTN_rpt2 146..260 CDD:409065 47/101 (47%)
Spectrin 284..394 CDD:395348 14/109 (13%)
SPEC 405..632 CDD:238103 42/233 (18%)
Spectrin 640..743 CDD:395348 17/79 (22%)
PTZ00184 750..>881 CDD:185504
EFhand_Ca_insen 854..920 CDD:430177
Blue background indicates that the domain is not in the aligned region.

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