DRSC/TRiP Functional Genomics Resources

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Protein Alignment MICAL-like and actn4

DIOPT Version :10

Sequence 1:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster
Sequence 2:XP_017951705.1 Gene:actn4 / 448522 XenbaseID:XB-GENE-494339 Length:926 Species:Xenopus tropicalis


Alignment Length:41 Identity:11/41 - (26%)
Similarity:17/41 - (41%) Gaps:6/41 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 FFGIYDGHRRSRPVSGSVSSDDRMVLQAVSPET-VGSTAVV 144
            :.|.||....:...||     :|..:|...|.| :|:...|
 Frog    56 YTGTYDTEGVTPTKSG-----ERQPIQITMPFTDIGTFETV 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 3/9 (33%)
LIM_like_1 146..207 CDD:188784
PTZ00449 <411..727 CDD:185628
bMERB_dom 785..933 CDD:463467
actn4XP_017951705.1 CH_ACTN_rpt1 40..144 CDD:409063 11/41 (27%)
CH_ACTN_rpt2 148..262 CDD:409065
SPEC 289..510 CDD:238103
SPEC 407..630 CDD:238103
SPEC 522..747 CDD:238103
PTZ00184 752..>883 CDD:185504
EFhand_Ca_insen 856..922 CDD:430177
Blue background indicates that the domain is not in the aligned region.

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