DRSC/TRiP Functional Genomics Resources

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Protein Alignment MICAL-like and actn4

DIOPT Version :10

Sequence 1:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster
Sequence 2:XP_021337011.1 Gene:actn4 / 322221 ZFINID:ZDB-GENE-030131-940 Length:923 Species:Danio rerio


Alignment Length:862 Identity:178/862 - (20%)
Similarity:286/862 - (33%) Gaps:274/862 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KALEYWCRVVTQGYNGVKVENMTTSWRNGLAFCAIIHHFRPDLIDFDRLKADDIYENNDLAFTTA 78
            :.|..||:..|..|..|.|:|...||::||||.|:||..||:|||:|:|:.||...|.:.||..|
Zfish   157 EGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIDYDKLRKDDPVTNLNNAFEVA 221

  Fly    79 EKYLGIPALLDAADMVSYEVPDRLSILTYLSQFYKVLGKSLKHPKPEEPLGEESEPPQKVMHIVG 143
            |:||.||.:|||.|:|:...||..:|:||:|.||.....:.|                       
Zfish   222 ERYLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQK----------------------- 263

  Fly   144 MPRRDKCQKCNLPVFLAERVLVGKRAYHRTCLKCARCSSLLTPGSFYETEVNNIYCCETCPDEES 208
                                                          .||..|.| |.....::|:
Zfish   264 ----------------------------------------------AETAANRI-CKVLAVNQEN 281

  Fly   209 EP--------ESDILKLKTTTTDSPNDKQMVAQSSDYSEAEDKQEDLEDNDIRTTDKPENFQPPS 265
            |.        .||:|:....|.....::   |.....:|.:.|.||.  .|.|...|     ||.
Zfish   282 EHLMEDYEKLASDLLEWIRRTIPWLENR---APEKTMAEMQQKLEDF--RDYRRVHK-----PPK 336

  Fly   266 NKDEQNNELTINPVNPILSEERKISFIPLDEEDGGLIEQYNKSTTPVKPA-----------IPEK 319
            .:::...|:..|.:...|....:.:|:|   .:|.::...|.:...::.|           |...
Zfish   337 VQEKCQLEINFNTLQTKLRLSNRPAFMP---SEGRMVSDINGAWHKLEGAEKGYEEWLLNEIRRL 398

  Fly   320 PKVSTLPLDDEQHAGVEQ---NNDLAVSPENDIPKEKLKISSVSIYL------EDDRLVVDAIHP 375
            .::..|.....|.|.:.:   :...|:..:.|.  |...:|.:...|      |.|.    |.|.
Zfish   399 ERLDHLAEKFRQKAAIHEGWTDGKEAMLTQKDY--ETASLSEIKALLKKHEAFESDL----AAHQ 457

  Fly   376 DNLDKQEALNNTSDALIPESQEAPIPENNTQVAIKPEDHISPRKENKIFSNTESCSKQEGVLPKQ 440
            |.:::..|:....:.|  :..::|......|...:..|.:....:|:    .||..:.|    ||
Zfish   458 DRVEQIAAIAQELNEL--DYYDSPSVNARCQKICEQWDALGSLTQNR----RESLERTE----KQ 512

  Fly   441 MDLESPKDKVIETKASETDYPEDLNPFK-------DD----------DSSKG--------ANPFD 480
              |||..:..:|       |.:...||.       :|          |..:|        .:...
Zfish   513 --LESIDELYLE-------YAKRAAPFNNWMEGAMEDLQDMFIVHNIDEIQGLITAHEQFKSTLP 568

  Fly   481 SSDDEVELLKAIPAQQSK-----GKVVPPRPPPPKIGLSSISNPSEK-----PHSSPTLSH---- 531
            .::.|.|.::||.|:..|     |..:....|...|...||....||     |.....|..    
Zfish   569 EANKEREAIQAIQAEVQKIANYNGIKLAGNNPYTTITPQSIDKKWEKVQQLVPQRDQALQEELTR 633

  Fly   532 -----------GKKMPMPTP----------RISISKTQTPAKPMTHQGQ--------KSSISSSS 567
                       ..:..|..|          ||||....|....:||..|        |.:|....
Zfish   634 QQSNDHLRRQFANQANMIGPWIQNKMEEIGRISIEMNGTLEDQLTHLSQYEQSIIEYKPNIDQLE 698

  Fly   568 SEH--LNSIRTFDRGADDRGSSISLPSANGPRKPLRASVGSPLRSEESSPTTSLSSITSPMRKKR 630
            .:|  :.....|    |::.::.::.......:.|..::...:...|:      ..:|...:...
Zfish   699 GDHQLIQEALIF----DNKYTAYTMEHLRVGWEQLLTTIARTINEIEN------QVLTRDAKGIS 753

  Fly   631 QAPLPPIQTD---FDSDPGFSKLSDEQKALL--------HTQLKAPNLGDS---TRRLIPLDQSL 681
            |..|...:|.   ||.|......|:|.||.|        :.:.|...:.||   ...||....||
Zfish   754 QEQLHEYRTSFNHFDKDHSGLLQSEEFKACLISLGYDVENDKQKRTGIMDSDDFRALLISTGNSL 818

  Fly   682 ----------------------------LSDEATESSNYDESLST----------SNADEEVNVV 708
                                        :|.|.|::...|:.:::          ..|:|     
Zfish   819 GDAEFARIMGIVDPNNSGAVTFQAFIDFMSRETTDTDTADQVIASFKILAGDKNYITAEE----- 878

  Fly   709 YRRILVPPTQPENTVER 725
            .||.| ||.|.|..:.|
Zfish   879 LRREL-PPDQAEYCIAR 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 48/100 (48%)
LIM_like_1 146..207 CDD:188784 5/60 (8%)
PTZ00449 <411..727 CDD:185628 82/437 (19%)
bMERB_dom 785..933 CDD:463467
actn4XP_021337011.1 CH_ACTN_rpt1 37..141 CDD:409063
CH_ACTN_rpt2 145..259 CDD:409065 48/101 (48%)
Spectrin 283..393 CDD:395348 22/122 (18%)
SPEC 404..631 CDD:238103 49/251 (20%)
Spectrin 639..742 CDD:395348 16/106 (15%)
PTZ00184 749..>880 CDD:185504 24/135 (18%)
EFhand_Ca_insen 853..919 CDD:430177 11/48 (23%)
Blue background indicates that the domain is not in the aligned region.

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