DRSC/TRiP Functional Genomics Resources

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Protein Alignment MICAL-like and CG34417

DIOPT Version :10

Sequence 1:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster
Sequence 2:NP_001259282.1 Gene:CG34417 / 31591 FlyBaseID:FBgn0085446 Length:5182 Species:Drosophila melanogaster


Alignment Length:1045 Identity:209/1045 - (20%)
Similarity:365/1045 - (34%) Gaps:316/1045 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 PESDILKLKT----------TTTDSPNDKQM---VAQSSDYSEAED------KQEDLEDNDIRTT 255
            ||..|...||          :...|| :||:   |.|.|..|..:|      ::|::..:.|.||
  Fly  1150 PEKQIPDPKTRDQGPGLPRISPRQSP-EKQLPKDVPQKSRQSPEKDLTNQQRREEEIFRSTITTT 1213

  Fly   256 DK------PENFQPPSNKDEQNNELT-INPVNPILSEERKISFIPLDEEDGGLIEQYNKSTTPV- 312
            .|      .|.| ..:.:|.||..:: ..|..|..:|........::..|||    :...||.| 
  Fly  1214 QKRTTNNLNEEF-ITNERDNQNQPISEKKPQIPANAEPNTKPSETIESPDGG----FPSKTTEVE 1273

  Fly   313 -KPAIPEKPKVSTLPL------DD--EQHAGVEQNND----LAVSPEN---DIPKEKLKISSVSI 361
             :|.:.|.|......|      :|  .|..|:|::.|    ....|.|   |:......|.::.:
  Fly  1274 AQPEVKESPTYRKKGLTRRETFEDRCRQILGMEEDGDTQGTYTERPNNEQEDVNVSHTTIETIQV 1338

  Fly   362 YLED----------------------------DRLVVDAIHPDNLDKQEALNNTSDALIPESQEA 398
            .:||                            :.|.||....:::          :.|:..|:::
  Fly  1339 KIEDCPNDDEDDKPRRVTETYVVRTQPKIKVEEELFVDVTEAEDV----------EILVNPSKKS 1393

  Fly   399 PIPENNTQVAIKPEDHISPRKENKIFSNTESCSKQEGVLPKQMDLES----PKDKVIETKASET- 458
            |..|::.:....||...|||.:.:|.|     ..::|..|.|...|.    |:::....|..|| 
  Fly  1394 PKEEDSPKYPKGPETPKSPRNDQRIPS-----IPKKGQSPVQFKTEETPRYPQEQERYPKEPETS 1453

  Fly   459 DYPED--LNPFKD---------------DDSSKGANPFDSSDDEVELLKAIPAQQS--------- 497
            .||::  .||.:|               .:.||..:|..|...|    :.:|..|.         
  Fly  1454 QYPKESPRNPKEDAETININEETTIVITKEGSKSPSPRWSPSPE----RRVPKSQQPPSPTASPS 1514

  Fly   498 ----KGKVVP---------------------------PRPPPPKIGLSSISNPSEK-PHSSP--- 527
                .|:.:|                           ||.|.|.....: :.||:| |...|   
  Fly  1515 VSPVSGRKIPNEVESNFVTEKIIDCRGKTVVEKISQRPRTPSPTTPKKN-TKPSQKIPERVPETE 1578

  Fly   528 ------TLSHGKKMPMPTPRISISKTQTPAK---------PMTHQGQKSSISSSSSEHLNSI--R 575
                  :.|..||    |..:|::||:|..:         |:..:..:|.:.:..|...:|:  |
  Fly  1579 SEPEKDSESETKK----TTSVSVTKTETERRNSRTTKTKQPLPLKEPQSKVPAGKSPRKDSLTGR 1639

  Fly   576 TFDRGADDRGSSISLPSANGPRKPLRASVGSP-----LRSEESSPTTSLSSITSPMRKKRQAPLP 635
            ..|...::...:.:..:....|||...: |||     |||......||.....:|...:.:.|..
  Fly  1640 KRDSLVEETRITTTTTTTRQGRKPSDTN-GSPSIKDRLRSSPRKQKTSPQQTRTPTPAQTRNPED 1703

  Fly   636 PIQTDFDS-DPGFSKLSDEQK----ALLHTQL-------KAP-----------NLGDSTRRLIPL 677
            .:..|..| |...:::.:|::    ..:||::       |:|           |:....|:| |:
  Fly  1704 DVDGDSSSPDASPTRVGNERRRSSNISVHTEIIIDHMAPKSPKTERRSQGGTGNVPSPIRKL-PV 1767

  Fly   678 DQSLLSDEATESSNYDESLSTSNADEEVNVVYRRILVPPTQPENTVERSKEDQKSP--------I 734
            .:...|......:..|::...:.:..| |::......|  .||.:..:...|:..|        |
  Fly  1768 TERKESAPVPRVTRRDKAEKVTRSTSE-NIIKMSGTKP--HPEMSSLKPGGDRSRPSKCCTTKTI 1829

  Fly   735 VYNDFDRNVSPLGHNKST----------HGKWKRRKGPAPAVPIP---------PR--KVLQRLP 778
                   |:|....|.:|          ..|..|...|...||.|         ||  .|:|. |
  Fly  1830 -------NLSEQRINTATDIEGVIIDIQQAKSSREPSPDRIVPTPVPAELETGKPRYPDVVQE-P 1886

  Fly   779 LQEIRHEFEIIAVQQLGLEKQGVILEKMIRDRCERS------------LDATDTDGPESAEVLTN 831
            ..|.|.:.::..:.....|.|..:       .|:.|            ||....:.|:|.:...|
  Fly  1887 DDEPRRKPQVTNIPIFEEESQTYV-------GCQISELHSSNGIEVDILDNPTVEAPKSLDYPVN 1944

  Fly   832 SKEVEDLILQLFELVNEKNELFRRQAELMYLRRQHRLEQEQADIEHEIRVLMGQPEHN------- 889
            :.:.::.:|.    |:||...|...||.:      :..:..|....|..|....||::       
  Fly  1945 TPDTDESLLS----VHEKVSRFTHSAEKV------KEPKVSAPFSREFDVNAKIPENDDCLLSIN 1999

  Fly   890 -KTDSDKAHEEVLI--NRLVKVVEMRNEVIDSLETDRVREARED--MSIKNRLHIYNSEREE--- 946
             |.|......|.:|  ..|....|:....::.::.:.:   |:|  :|:..::|.:....|:   
  Fly  2000 QKVDKFLRTAENVIRPTSLPSRPEIERPGLEEIDEELL---RDDCTLSVSQKVHKFIDTAEKLAP 2061

  Fly   947 --PPAHPRSADKSSKKLSKKE--RKKLKEENKLGKGKKSDLDKDVDESEQAPALE-------KVK 1000
              |...||......:.:|::.  .::|.||::    .:.|.|.||::.:|...||       .|.
  Fly  2062 TMPQKSPRLVANIERHISRQSEPERELDEESE----PELDRDTDVEDDDQTSQLETEEEITQTVT 2122

  Fly  1001 KKRNL 1005
            ||..|
  Fly  2123 KKETL 2127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102
LIM_like_1 146..207 CDD:188784
PTZ00449 <411..727 CDD:185628 84/426 (20%)
bMERB_dom 785..933 CDD:463467 29/171 (17%)
CG34417NP_001259282.1 PHA03247 <566..1191 CDD:223021 12/41 (29%)
PTZ00449 <1035..1421 CDD:185628 62/291 (21%)
PTZ00449 <1394..1702 CDD:185628 66/322 (20%)
PTZ00121 <2080..2248 CDD:173412 14/52 (27%)
Smoothelin 2594..2636 CDD:463614
Smoothelin 3127..3176 CDD:463614
Smc <3810..>3916 CDD:440809
PHA03247 <4126..4601 CDD:223021
CH_SMTN-like 5074..5179 CDD:409049
Blue background indicates that the domain is not in the aligned region.

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