DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MICAL-like and Actn

DIOPT Version :10

Sequence 1:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster
Sequence 2:NP_477485.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster


Alignment Length:1026 Identity:205/1026 - (19%)
Similarity:341/1026 - (33%) Gaps:409/1026 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TGTKALEYWCRVVTQGYNGVKVENMTTSWRNGLAFCAIIHHFRPDLIDFDRLKADDIYENNDLAF 75
            |..:.|..||:..|..|..|.|:|...|:::||||||:||..||||||:.:|..|:..||.:.||
  Fly   148 TAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYAKLSKDNPLENLNTAF 212

  Fly    76 TTAEKYLGIPALLDAADMVSYEVPDRLSILTYLSQFYKVLGKSLKHPKPEEPLGEESEPPQKVMH 140
            ..|||||.||.:||..|:::...||..:|:||:|.:|...                 :..|:|.:
  Fly   213 DVAEKYLDIPRMLDPDDLINTPKPDERAIMTYVSCYYHAF-----------------QGAQQVGN 260

  Fly   141 IVGMPRRDKCQKCNLPVFLAERVLVGKRAYHRTCLKCARCSSLLTPGSFYETEVNNIYCCETCPD 205
            :..:|.         |.          |.|                     |.|.|.|..||..:
  Fly   261 VTHVPE---------PT----------RQY---------------------TYVPNNYNAETAAN 285

  Fly   206 EESEPESDILKLKTTTTDSPNDKQMVAQSSDYSEAEDKQEDLEDNDIRTTDKPENFQPPSNKDEQ 270
            ...:    :||:     :..|::.|       .|.|....||.:...||       .|..|..:.
  Fly   286 RICK----VLKV-----NQENERLM-------EEYERLASDLLEWIRRT-------MPWLNSRQA 327

  Fly   271 NNELTINPVNPILSEERKISFIPLDEEDGGLIEQYNKSTTPVKPAIPEKPKVSTLPLDDEQHAGV 335
            :|.|.        ..::|             :|:|.......||     |:|       ||.|.:
  Fly   328 DNSLA--------GVQKK-------------LEEYRTYRRKHKP-----PRV-------EQKAKL 359

  Fly   336 EQN-NDLAVSPENDIPKEKLKISSVSIYLEDDRLVVDAIHPDNLDKQEALNNTSDALIPESQEAP 399
            |.| |.|         :.||::|:...||..:...|..|           :|:...|        
  Fly   360 ETNFNTL---------QTKLRLSNRPAYLPTEGKTVSDI-----------SNSWKGL-------- 396

  Fly   400 IPENNTQVAIKPEDHISPRKENKIFSNTESCSKQEGVLPKQMDLESPKDKVIETKASETDYPEDL 464
                  ::|            .|.|        :|.:|.:.|.||.     :|..|.:..:..|.
  Fly   397 ------ELA------------EKAF--------EEWLLAETMRLER-----LEHLAQKFKHKADA 430

  Fly   465 NPFKDDDSSKGANPFDSSDD----EVELLKAIPAQQSKGKVVPPRPPPPKIGLSSISNPSEKPHS 525
            :    :|.::|......|.|    ::..|||:                            :|.|.
  Fly   431 H----EDWTRGKEEMLQSQDFRQCKLNELKAL----------------------------KKKHE 463

  Fly   526 SPTLSHGKKMPMPTPRISISKTQTPAKPMTHQGQKSSISSSSSEHLNSIRTFD---------RGA 581
            :                      ..:....||.:...|::.:.| ||::...|         |..
  Fly   464 A----------------------FESDLAAHQDRVEQIAAIAQE-LNTLEYHDCVSVNARCQRIC 505

  Fly   582 D--DRGSSISLPSANGPRKPLRASVGSPLRSEESSPTTSLSSITSPMRKKRQAP----LPPIQTD 640
            |  ||..:::        :..|.::....|..|......|..      .||.||    |...:.|
  Fly   506 DQWDRLGALT--------QRRRTALDEAERILEKIDILHLEF------AKRAAPFNNWLDGTRED 556

  Fly   641 FDSDPGFSKLSDEQKALL--HTQLKAPNLGDSTRRLIPLDQSLLSDEATESSNYDESLSTSNADE 703
            . .|.......:|.:.|:  |.|.|| .||:                               ||:
  Fly   557 L-VDMFIVHTMEEIQGLIQAHDQFKA-TLGE-------------------------------ADK 588

  Fly   704 EVNVVYRRILVPPTQPENTVERSK-----EDQKSPIVYNDFDRNVSPLGHNKSTHGKWKRRKGPA 763
            |.|::...:    .:.|:.|::.:     |:..:.:..||..|             ||.      
  Fly   589 EFNLIVNLV----REVESIVKQHQIPGGLENPYTTLTANDMTR-------------KWS------ 630

  Fly   764 PAVPIPPRKVLQRLPLQEIRHEFEIIAVQQLGLEKQGVILEKMIRDRC-------ERSLDATDTD 821
                    .|.|.:|.::     :.:| .:|..::...:|.:...::.       ||.:||....
  Fly   631 --------DVRQLVPQRD-----QTLA-NELRKQQNNEMLRRQFAEKANIVGPWIERQMDAVTAI 681

  Fly   822 GPESAEVLTNSKEVEDLILQLFELVNEKNELFRRQAELMYLRRQHRLEQEQADIEHE-------- 878
            |      :.....:||   ||..|...:..::..:..:..|.:.|:..||....|:.        
  Fly   682 G------MGLQGSLED---QLHRLKEYEQAVYAYKPNIEELEKIHQAVQESMIFENRYTNYTMET 737

  Fly   879 IRVLMGQPEHNKTDSDKAHEEVL--INRLVKVVEMRNEVI--DS--LETDRVREAREDMS--IKN 935
            :||              ..|::|  |||.:..||  |:::  ||  :..:::.|.|...:  .||
  Fly   738 LRV--------------GWEQLLTSINRNINEVE--NQILTRDSKGISQEQLNEFRSSFNHFDKN 786

  Fly   936 RLHIYNSEREEPPAHPRSADKSSKKLSKKERKK--LKEENKLGKGKKSDLD 984
            |                     :.:||.:|.|.  :.....:||.::.|||
  Fly   787 R---------------------TGRLSPEEFKSCLVSLGYSIGKDRQGDLD 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 47/103 (46%)
LIM_like_1 146..207 CDD:188784 9/60 (15%)
PTZ00449 <411..727 CDD:185628 55/336 (16%)
bMERB_dom 785..933 CDD:463467 32/170 (19%)
ActnNP_477485.1 CH_ACTN_rpt1 31..135 CDD:409063
CH_ACTN_rpt2 139..252 CDD:409065 47/103 (46%)
SPEC 302..525 CDD:238103 65/384 (17%)
SPEC 420..647 CDD:238103 57/365 (16%)
SPEC 538..760 CDD:238103 58/322 (18%)
EFh 775..842 CDD:238008 14/63 (22%)
EFhand_Ca_insen 847..913 CDD:430177
Blue background indicates that the domain is not in the aligned region.

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