DRSC/TRiP Functional Genomics Resources

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Protein Alignment MICAL-like and Micall2

DIOPT Version :10

Sequence 1:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster
Sequence 2:NP_001406493.1 Gene:Micall2 / 288515 RGDID:1307875 Length:1006 Species:Rattus norvegicus


Alignment Length:1145 Identity:286/1145 - (24%)
Similarity:424/1145 - (37%) Gaps:335/1145 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KALEYWCRVVTQGYNGVKVENMTTSWRNGLAFCAIIHHFRPDLIDFDRLKADDIYENNDLAFTTA 78
            |||:.|||...:||..|.:.|||||:|:|||||||:|..|||||:|:.|:.::|||||.|||..|
  Rat     5 KALQEWCRQQCEGYRDVSITNMTTSFRDGLAFCAILHRHRPDLINFNALRKENIYENNKLAFQVA 69

  Fly    79 EKYLGIPALLDAADMVSYEVPDRLSILTYLSQFYKVL-GKS-------LKHP---KPEEPLGEES 132
            |:.|||||||||.|||:.::|||||||||:||:|... |:|       :|.|   ..||..|::.
  Rat    70 EEQLGIPALLDAEDMVALKIPDRLSILTYVSQYYNYFHGRSPIGGMAGMKRPSSDSTEELSGKKK 134

  Fly   133 EP-------------------------------------PQKVMHIVGMPRRDKCQKCNLPVFLA 160
            .|                                     |:.....||......|..|...|.|.
  Rat   135 VPSQPAKLSSPVPTQRLPLSPARTNPVVQRNEGVSERPSPKAAPGTVGSSVSSICGVCGKHVHLV 199

  Fly   161 ERVLVGKRAYHRTCLKCARCSSLLTPGSFYETEVNNIYCCETCPDEESEPESDILKLKTTTTDSP 225
            :|.|...|.|||:|.:|.:|||.|..|::..|....::   .|....||..|...||....:..|
  Rat   200 QRHLADGRLYHRSCFRCKQCSSTLHSGAYRATGEPGVF---VCTHHSSEAVSVSPKLSNLASRQP 261

  Fly   226 N----DKQMVAQSSDYSEAEDKQEDLEDNDIRTTDKPENFQPPSNKDEQNNELTI---------N 277
            .    |.:.:..|....|...:...|.   .||..........:.|.....|||.         :
  Rat   262 GGGIADTRPIGVSQKVLETNGEATPLR---ARTAAWEHAGGNRAAKGFVQTELTPPATSRVHVGS 323

  Fly   278 PVNPILSEERKISFIPLDEEDGGLIEQYNKSTTPVKPAIP---------------EKPKVS---- 323
            |..|.|    .:|.:.....:       :|:||.|..:.|               .:|.||    
  Rat   324 PAGPRL----PMSTVTTTSAN-------SKATTHVTNSSPVGWSSSAQSSTGTSGSRPVVSPSAL 377

  Fly   324 ----TLPLDDEQHAGVEQNNDLAVSPENDIP--------------KEKL-----------KISSV 359
                ::|.......||:...:.:....:..|              :||.           ..||.
  Rat   378 GAHLSVPQGQAASKGVKTQLNSSTDSSSTAPTPAWTSSSSRTQQAREKFFHNLSPAPAPAPASSS 442

  Fly   360 SIYLEDDRLVVDAIHPDNLDKQEALNNTSDALIPESQEAPIPENNTQVAIKPEDHISPRKENKIF 424
            |.:......||.|  |..  |...|.|||.:.:|.:....:|.:.....:......:|.......
  Rat   443 SSHASRVPTVVTA--PSG--KVSPLVNTSTSKVPSATVVTVPTSKASTVVTAPTSKAPTVVTVPI 503

  Fly   425 SN-----TESCSKQEGVLPKQMD-----LESPKDK--------------VIETKASETDYPEDLN 465
            |.     |...||...|:.....     :.:|..|              |:.|.||:.....| |
  Rat   504 SKAPTVVTAPTSKVSTVVTVPTSKASTVVTAPTSKASTVVTVPTGRGHVVVNTSASKVSGVVD-N 567

  Fly   466 PFKDDDSSKGAN----------------PFDSSDDEVELLKAIPAQQSKGKVVPPRPPPPKIGLS 514
            |.::....:..:                |..||.....:|..:|..:     |||:.|..|:..|
  Rat   568 PAQESSREQALSVLRKALPGLTRAGSQAPSRSSPATSSVLITLPKNE-----VPPKVPSAKLSHS 627

  Fly   515 SISNPSEKPHSSPT--------------LSHGKKMPMPTPRI----SISKTQTPAK---PMTHQG 558
            :....|..|...||              |..|||.|..:|.|    ::|:.|...|   |.:.:|
  Rat   628 TTQAFSPTPKMEPTAPLSVGSTSWTSVSLQAGKKSPGISPGIGKTSAVSRPQAEVKGPGPTSQEG 692

  Fly   559 QKSSISSSSSEHLNSIRTFDRGADDRGSSISLPSANGPRKPLRASVGSPLRSEESSPTTSLSSIT 623
            |:        |.....|...:..|.|......|....||      .|...|...||..:|:....
  Rat   693 QE--------EGPEGWRARLKPVDKRALEQKEPVLAEPR------AGDTPRKASSSSDSSIHITL 743

  Fly   624 SPMRKKRQAPLPPIQTDFDSDPGFSKLSDEQKALLHTQLKAPNLGDSTRRLIPLDQSLLSDEATE 688
            :|:::||...|        :|.|.|             |.||:  ..:||               
  Rat   744 TPIQQKRTPCL--------ADSGSS-------------LAAPS--PPSRR--------------- 770

  Fly   689 SSNYDESLSTSNADEEVNVVYRRILVPPT--------QPENTVERSKEDQKSPIVYNDFDRNVSP 745
                                 ::::||||        |||   .:.::||....           
  Rat   771 ---------------------KKLVVPPTLDVSADWLQPE---LKKQDDQTRSC----------- 800

  Fly   746 LGHNKSTHGKWKRRK----------GPAPAVPIPPRKVLQRLPLQEIRHEFEIIAVQQLGLEKQG 800
                |.....|..|:          .|..||..|.|.....:..:|::.:.:.|..|...||.:|
  Rat   801 ----KEKTATWGTRESSAILDNDLVSPDEAVTSPVRLHPNYISQEELQRQLQDIERQLDALELRG 861

  Fly   801 VILEKMIRDRCERSLDATDTDGPESAEVLTNSKEVEDLILQLFELVNEKNELFRRQAELMYLRRQ 865
            |.|||.:|        |.:.|..|           :.|::..|.|::||..|.||::||||..:.
  Rat   862 VELEKRLR--------AAEGDASE-----------DGLMVDWFRLIHEKQLLLRRESELMYKSKD 907

  Fly   866 HRLEQEQADIEHEIRVLMGQPEHNKTDSDKAHEEVLINRLVKVVEMRNEVIDSLETDRVREARED 930
            ..||:.|.|::.|:|.||.:||..|:..|:..|:.|:|:.|..|..|::::|:|:.||:||..||
  Rat   908 QCLEERQLDLQGELRRLMEKPEGLKSPQDRKREQELLNQYVNTVNDRSDIVDNLDEDRLREQEED 972

  Fly   931 MSIKNRLHIYNSEREEPPAHPRSADKSSKKLSKKERKKLK 970
            ..:::.:.....:|:          ||...|||....|.|
  Rat   973 QMLESMIQNLGLQRK----------KSKSFLSKIWSSKSK 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 64/100 (64%)
LIM_like_1 146..207 CDD:188784 19/60 (32%)
PTZ00449 <411..727 CDD:185628 74/384 (19%)
bMERB_dom 785..933 CDD:463467 51/147 (35%)
Micall2NP_001406493.1 Forms an intramolecular interaction with the C-terminal coiled coil domain keeping the protein in a closed conformation. /evidence=ECO:0000250 1..261 99/258 (38%)
CH_MICALL2 2..107 CDD:409102 64/101 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..181 7/66 (11%)
LIM_Mical_like_1 189..242 CDD:188828 19/55 (35%)
Necessary and sufficient for interaction with actinins. /evidence=ECO:0000250 262..394 24/145 (17%)
Chi1 311..>554 CDD:442692 42/257 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..450 23/149 (15%)
Herpes_BLLF1 <457..>678 CDD:282904 45/228 (20%)
Forms an intramolecular interaction with the N-terminal Calponin-homology and LIM zinc-binding domains-containing region keeping the protein in a closed conformation. /evidence=ECO:0000250 803..910 33/125 (26%)
bMERB_dom 846..975 CDD:463467 51/147 (35%)
Mediates interaction with RAB13 and is required for transition from the closed to the open conformation. /evidence=ECO:0000250 910..1006 34/103 (33%)

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