DRSC/TRiP Functional Genomics Resources

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Protein Alignment MICAL-like and Smtnl2

DIOPT Version :10

Sequence 1:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster
Sequence 2:NP_808444.1 Gene:Smtnl2 / 276829 MGIID:2442764 Length:456 Species:Mus musculus


Alignment Length:98 Identity:38/98 - (38%)
Similarity:55/98 - (56%) Gaps:1/98 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WCRVVTQGYNGVKVENMTTSWRNGLAFCAIIHHFRPDLIDFDRLKADDIYENNDLAFTTAEKYLG 83
            |||..|.||..|.::|.::||.:|:||||::|.|.||..|::.|......:|.:||||.||....
Mouse   355 WCRSKTVGYQHVDLQNFSSSWSDGMAFCALVHSFFPDAFDYNALSPTQRQKNFELAFTMAENLAN 419

  Fly    84 IPALLDAAD-MVSYEVPDRLSILTYLSQFYKVL 115
            ...|::..| ||....||.:.:.||:...|..|
Mouse   420 CERLIEVEDMMVMGRKPDPMCVFTYVQSLYNHL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 37/96 (39%)
LIM_like_1 146..207 CDD:188784
PTZ00449 <411..727 CDD:185628
bMERB_dom 785..933 CDD:463467
Smtnl2NP_808444.1 PRK09039 <8..>84 CDD:181619
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..140
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..190
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..310
CH_SMTNL2 347..453 CDD:409110 38/98 (39%)
Blue background indicates that the domain is not in the aligned region.

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