DRSC/TRiP Functional Genomics Resources

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Protein Alignment MICAL-like and smtna

DIOPT Version :10

Sequence 1:NP_648621.1 Gene:MICAL-like / 39475 FlyBaseID:FBgn0036333 Length:1010 Species:Drosophila melanogaster
Sequence 2:XP_073770530.1 Gene:smtna / 100333230 ZFINID:ZDB-GENE-091204-245 Length:293 Species:Danio rerio


Alignment Length:123 Identity:47/123 - (38%)
Similarity:69/123 - (56%) Gaps:5/123 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GTGTKALEY----WCRVVTQGYNGVKVENMTTSWRNGLAFCAIIHHFRPDLIDFDRLKADDIYEN 70
            |..||.::.    ||||.|:.|.||.::|.::||.:||||||::|.|.|:..::..|...|...|
Zfish   171 GPNTKDVKQMLLDWCRVKTEPYEGVNIQNFSSSWADGLAFCALVHRFFPEGFEYCTLNPYDRKSN 235

  Fly    71 NDLAFTTAEKYLGIPALLDAADMVSYEVPDRLSILTYLSQFYKVL-GKSLKHPKPEEP 127
            .:.||.|||:....|.|||..|::....||...:.||:.:||:.| .|.|...|.:.|
Zfish   236 FEKAFKTAERLADCPPLLDVDDLMRMREPDWKCVYTYIQEFYRCLVEKGLVKTKKKMP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICAL-likeNP_648621.1 CH_MICALL2 11..115 CDD:409102 41/107 (38%)
LIM_like_1 146..207 CDD:188784
PTZ00449 <411..727 CDD:185628
bMERB_dom 785..933 CDD:463467
smtnaXP_073770530.1 None
Blue background indicates that the domain is not in the aligned region.

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